RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 ATP6V1HQ9UI12 483 aa16.36■□□□□ 0.21
PSEN1-218ENST00000556864 PPIEQ9UNP9 301 aaKnown RBP16.36■□□□□ 0.21
PSEN1-218ENST00000556864 MYOCOSA0A1B0GUC4 107 aa16.35■□□□□ 0.21
PSEN1-218ENST00000556864 ERVH48-1M5A8F1 160 aa16.35■□□□□ 0.21
PSEN1-218ENST00000556864 UBDO15205 165 aa16.35■□□□□ 0.21
PSEN1-218ENST00000556864 ALDOCP09972 364 aaKnown RBP16.35■□□□□ 0.21
PSEN1-218ENST00000556864 MPIP34949 423 aa16.35■□□□□ 0.21
PSEN1-218ENST00000556864 FEN1P39748 380 aaKnown RBP16.35■□□□□ 0.21
PSEN1-218ENST00000556864 CCL11P51671 97 aa16.35■□□□□ 0.21
PSEN1-218ENST00000556864 DIO3P55073 304 aa16.35■□□□□ 0.21
PSEN1-218ENST00000556864 MYBPC3Q14896 1274 aa16.35■□□□□ 0.21
PSEN1-218ENST00000556864 RPS6KA2Q15349 733 aa16.35■□□□□ 0.21
PSEN1-218ENST00000556864 DPY19L1Q2PZI1 675 aa16.35■□□□□ 0.21
PSEN1-218ENST00000556864 SLC2A12Q8TD20 617 aa16.35■□□□□ 0.21
PSEN1-218ENST00000556864 PTPMT1Q8WUK0 201 aaPredicted RBP16.35■□□□□ 0.21
PSEN1-218ENST00000556864 CHMP6Q96FZ7 201 aa16.35■□□□□ 0.21
PSEN1-218ENST00000556864 THOC3Q96J01 351 aaKnown RBP16.35■□□□□ 0.21
PSEN1-218ENST00000556864 ZBTB18Q99592 522 aa16.35■□□□□ 0.21
PSEN1-218ENST00000556864 CNPPD1Q9BV87 410 aa16.35■□□□□ 0.21
PSEN1-218ENST00000556864 OR8D2Q9GZM6 311 aa16.35■□□□□ 0.21
PSEN1-218ENST00000556864 KCNK13Q9HB14 408 aa16.35■□□□□ 0.21
PSEN1-218ENST00000556864 GPR83Q9NYM4 423 aa16.35■□□□□ 0.21
PSEN1-218ENST00000556864 SH3BP4Q9P0V3 963 aa16.35■□□□□ 0.21
PSEN1-218ENST00000556864 TUBD1Q9UJT1 453 aa16.35■□□□□ 0.21
PSEN1-218ENST00000556864 DCTN4Q9UJW0 460 aa16.35■□□□□ 0.21
PSEN1-218ENST00000556864 EXO1Q9UQ84 846 aaKnown RBP16.35■□□□□ 0.21
PSEN1-218ENST00000556864 WASHC1A8K0Z3 465 aa16.34■□□□□ 0.21
PSEN1-218ENST00000556864 CEACAM4O75871 244 aa16.34■□□□□ 0.21
PSEN1-218ENST00000556864 CLCN2P51788 898 aa16.34■□□□□ 0.21
PSEN1-218ENST00000556864 CEBPEQ15744 281 aa16.34■□□□□ 0.21
PSEN1-218ENST00000556864 LSM12Q3MHD2 195 aaKnown RBP16.34■□□□□ 0.21
PSEN1-218ENST00000556864 PDCD4Q53EL6 469 aaKnown RBP16.34■□□□□ 0.21
PSEN1-218ENST00000556864 CPTPQ5TA50 214 aa16.34■□□□□ 0.21
PSEN1-218ENST00000556864 VWA5B2Q8N398 1253 aa16.34■□□□□ 0.21
PSEN1-218ENST00000556864 SLC5A8Q8N695 610 aa16.34■□□□□ 0.21
PSEN1-218ENST00000556864 NFAM1Q8NET5 270 aaPredicted RBP16.34■□□□□ 0.21
PSEN1-218ENST00000556864 OR1N1Q8NGS0 311 aa16.34■□□□□ 0.21
PSEN1-218ENST00000556864 ZNF675Q8TD23 568 aa16.34■□□□□ 0.21
PSEN1-218ENST00000556864 NCLNQ969V3 563 aa16.34■□□□□ 0.21
PSEN1-218ENST00000556864 PPWD1Q96BP3 646 aaKnown RBP16.34■□□□□ 0.21
PSEN1-218ENST00000556864 ZBED6CLQ96FA7 236 aaPredicted RBP16.34■□□□□ 0.21
PSEN1-218ENST00000556864 ZNF681Q96N22 645 aa16.34■□□□□ 0.21
PSEN1-218ENST00000556864 SLC25A23Q9BV35 468 aa16.34■□□□□ 0.21
PSEN1-218ENST00000556864 BRINP2Q9C0B6 783 aa16.34■□□□□ 0.21
PSEN1-218ENST00000556864 CXorf21Q9HAI6 301 aa16.34■□□□□ 0.21
PSEN1-218ENST00000556864 TEKT2Q9UIF3 430 aa16.34■□□□□ 0.21
PSEN1-218ENST00000556864 LHX6Q9UPM6 363 aa16.34■□□□□ 0.21
PSEN1-218ENST00000556864 TRIM33Q9UPN9 1127 aa16.34■□□□□ 0.21
PSEN1-218ENST00000556864 USP24Q9UPU5 2620 aa16.34■□□□□ 0.21
PSEN1-218ENST00000556864 MAP1BP46821 2468 aaKnown RBP16.34■□□□□ 0.21
PSEN1-218ENST00000556864 A0A0G2JND7 137 aa16.33■□□□□ 0.2
PSEN1-218ENST00000556864 TRBV11-1A0A0K0K1C0 115 aa16.33■□□□□ 0.2
PSEN1-218ENST00000556864 A0A1W2PS29 197 aa16.33■□□□□ 0.2
PSEN1-218ENST00000556864 A6NL46 340 aa16.33■□□□□ 0.2
PSEN1-218ENST00000556864 MYO1GB0I1T2 1018 aa16.33■□□□□ 0.2
PSEN1-218ENST00000556864 E9PBE3 544 aa16.33■□□□□ 0.2
PSEN1-218ENST00000556864 DNAJB5O75953 348 aa16.33■□□□□ 0.2
PSEN1-218ENST00000556864 DDAH2O95865 285 aa16.33■□□□□ 0.2
PSEN1-218ENST00000556864 NCBP2P52298 156 aaKnown RBP eCLIP16.33■□□□□ 0.22e-8■■□□□ 11.9
PSEN1-218ENST00000556864 GNGT1P63211 74 aa16.33■□□□□ 0.2
PSEN1-218ENST00000556864 Q0VFX4 171 aa16.33■□□□□ 0.2
PSEN1-218ENST00000556864 KCNAB2Q13303 367 aa16.33■□□□□ 0.2
PSEN1-218ENST00000556864 ZNF750Q32MQ0 723 aa16.33■□□□□ 0.2
PSEN1-218ENST00000556864 CRB2Q5IJ48 1285 aa16.33■□□□□ 0.2
PSEN1-218ENST00000556864 ANKRD26P1Q6NSI1 321 aa16.33■□□□□ 0.2
PSEN1-218ENST00000556864 CAMKMTQ7Z624 323 aa16.33■□□□□ 0.2
PSEN1-218ENST00000556864 LGI4Q8N135 537 aa16.33■□□□□ 0.2
PSEN1-218ENST00000556864 RFWD2Q8NHY2 731 aa16.33■□□□□ 0.2
PSEN1-218ENST00000556864 TTC9Q92623 222 aa16.33■□□□□ 0.2
PSEN1-218ENST00000556864 ERP27Q96DN0 273 aa16.33■□□□□ 0.2
PSEN1-218ENST00000556864 THOC1Q96FV9 657 aaKnown RBP16.33■□□□□ 0.2
PSEN1-218ENST00000556864 RILPQ96NA2 401 aa16.33■□□□□ 0.2
PSEN1-218ENST00000556864 ZNF317Q96PQ6 595 aaPredicted RBP16.33■□□□□ 0.2
PSEN1-218ENST00000556864 EBF4Q9BQW3 602 aa16.33■□□□□ 0.2
PSEN1-218ENST00000556864 ACSS1Q9NUB1 689 aaPredicted RBP16.33■□□□□ 0.2
PSEN1-218ENST00000556864 ERVK-19Q9WJR5 959 aa16.33■□□□□ 0.2
PSEN1-218ENST00000556864 PCDHGB7Q9Y5F8 929 aa16.33■□□□□ 0.2
PSEN1-218ENST00000556864 PCDHGA9Q9Y5G4 932 aaKnown RBP16.33■□□□□ 0.2
PSEN1-218ENST00000556864 MASP2O00187 686 aa16.32■□□□□ 0.2
PSEN1-218ENST00000556864 SEC16AO15027 2179 aa16.32■□□□□ 0.2
PSEN1-218ENST00000556864 CELA2AP08217 269 aa16.32■□□□□ 0.2
PSEN1-218ENST00000556864 IFI6P09912 130 aa16.32■□□□□ 0.2
PSEN1-218ENST00000556864 ITGAMP11215 1152 aa16.32■□□□□ 0.2
PSEN1-218ENST00000556864 SFTPCP11686 197 aa16.32■□□□□ 0.2
PSEN1-218ENST00000556864 LSP1P33241 339 aa16.32■□□□□ 0.2
PSEN1-218ENST00000556864 ZNF267Q14586 743 aaPredicted RBP16.32■□□□□ 0.2
PSEN1-218ENST00000556864 ZNF385BQ569K4 471 aa16.32■□□□□ 0.2
PSEN1-218ENST00000556864 AGAP7PQ5VUJ5 663 aa16.32■□□□□ 0.2
PSEN1-218ENST00000556864 TMEM198Q66K66 360 aa16.32■□□□□ 0.2
PSEN1-218ENST00000556864 HSDL2Q6YN16 418 aa16.32■□□□□ 0.2
PSEN1-218ENST00000556864 RNF111Q6ZNA4 994 aa16.32■□□□□ 0.2
PSEN1-218ENST00000556864 RIMKLAQ8IXN7 391 aa16.32■□□□□ 0.2
PSEN1-218ENST00000556864 MIER2Q8N344 545 aa16.32■□□□□ 0.2
PSEN1-218ENST00000556864 KRTCAP2Q8N6L1 136 aa16.32■□□□□ 0.2
PSEN1-218ENST00000556864 GLB1L3Q8NCI6 653 aaPredicted RBP16.32■□□□□ 0.2
PSEN1-218ENST00000556864 APCDD1LQ8NCL9 501 aa16.32■□□□□ 0.2
PSEN1-218ENST00000556864 OR7G1Q8NGA0 311 aa16.32■□□□□ 0.2
PSEN1-218ENST00000556864 OR7A2PQ8NGA2 310 aa16.32■□□□□ 0.2
PSEN1-218ENST00000556864 OR9A2Q8NGT5 310 aa16.32■□□□□ 0.2
PSEN1-218ENST00000556864 BRIX1Q8TDN6 353 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms