RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 J3KR12 359 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 TEX28O15482 410 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 PLRG1O43660 514 aaKnown RBP4.88□□□□□ -1.63
SRP54-211ENST00000556445 CCDC22O60826 627 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 LUC7L3O95232 432 aaKnown RBP4.88□□□□□ -1.63
SRP54-211ENST00000556445 VAPBO95292 243 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 CXCL14O95715 111 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 GLUD1P00367 558 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 ALDOAP04075 364 aaKnown RBP4.88□□□□□ -1.63
SRP54-211ENST00000556445 KRT6BP04259 564 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 SERPINE1P05121 402 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 CHRM4P08173 479 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 RBP1P09455 135 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 OGNP20774 298 aaKnown RBP4.88□□□□□ -1.63
SRP54-211ENST00000556445 NMBRP28336 390 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 HOXD9P28356 352 aaPredicted RBP4.88□□□□□ -1.63
SRP54-211ENST00000556445 PTPN4P29074 926 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 HOXA9P31269 272 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 CA8P35219 290 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 SERPINB5P36952 375 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 HSD17B2P37059 387 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 SLC26A3P40879 764 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 KRT6CP48668 564 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 CSNK1DP48730 415 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 SUOXP51687 545 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 F2RL1P55085 397 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 TPTEP56180 551 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 FOXL2P58012 376 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 RPL26P61254 145 aaKnown RBP4.88□□□□□ -1.63
SRP54-211ENST00000556445 NAA20P61599 178 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 AP1S1P61966 158 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 DEFB103AP81534 67 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 ACY1Q03154 408 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 ACVR1Q04771 509 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 SLC10A7Q0GE19 358 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 MTAPQ13126 283 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 CDH18Q13634 790 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 DDX39BQ13838 428 aaKnown RBP4.88□□□□□ -1.63
SRP54-211ENST00000556445 POU6F1Q14863 301 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 CEBPEQ15744 281 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 KCTD21Q4G0X4 260 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 FASTKD1Q53R41 847 aaKnown RBP4.88□□□□□ -1.63
SRP54-211ENST00000556445 ATAD3BQ5T9A4 648 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 N4BP2L1Q5TBK1 243 aaPredicted RBP4.88□□□□□ -1.63
SRP54-211ENST00000556445 FAM90A2PQ658T7 463 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 ATG9BQ674R7 924 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 NADSYN1Q6IA69 706 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 NEPROQ6NW34 567 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 CLEC2AQ6UVW9 174 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 NAPRTQ6XQN6 538 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 ABI3BPQ7Z7G0 1075 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 ZC3HC1Q86WB0 502 aaKnown RBP4.88□□□□□ -1.63
SRP54-211ENST00000556445 TIGD4Q8IY51 512 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 IZUMO1Q8IYV9 350 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 SPARTQ8N0X7 666 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 DCAF4L2Q8NA75 395 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 C11orf65Q8NCR3 313 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 ARRDC2Q8TBH0 407 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 XAGE5Q8WWM1 108 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 LPGAT1Q92604 370 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 NPIPB3Q92617 1050 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 KAT2AQ92830 837 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.88□□□□□ -1.63
SRP54-211ENST00000556445 MIB2Q96AX9 1013 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 OTUB2Q96DC9 234 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 APOL2Q9BQE5 337 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 BCL7BQ9BQE9 202 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 ADGRE3Q9BY15 652 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 B3GNT4Q9C0J1 378 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 WWP1Q9H0M0 922 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 P2RY12Q9H244 342 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 MFSD1Q9H3U5 465 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 PDFQ9HBH1 243 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 SAR1AQ9NR31 198 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 ASAH2Q9NR71 780 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 SLC22A11Q9NSA0 550 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 TREX1Q9NSU2 369 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 COPG2Q9UBF2 871 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 HAO1Q9UJM8 370 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 FBXO5Q9UKT4 447 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 AGO1Q9UL18 857 aaKnown RBP4.88□□□□□ -1.63
SRP54-211ENST00000556445 RPL26L1Q9UNX3 145 aaKnown RBP4.88□□□□□ -1.63
SRP54-211ENST00000556445 EXO1Q9UQ84 846 aaKnown RBP4.88□□□□□ -1.63
SRP54-211ENST00000556445 PLEKHA6Q9Y2H5 1048 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 SLC27A6Q9Y2P4 619 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 WBP11Q9Y2W2 641 aaKnown RBP4.88□□□□□ -1.63
SRP54-211ENST00000556445 ACOT9Q9Y305 439 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 COL4A6Q14031 1691 aa4.88□□□□□ -1.63
SRP54-211ENST00000556445 DENND4CQ5VZ89 1909 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 MTCL1Q9Y4B5 1905 aaKnown RBP4.87□□□□□ -1.63
SRP54-211ENST00000556445 TRBV2A0A0J9YWF9 115 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 A0A1W2PQ67 120 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 WDR91A4D1P6 747 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 NCF1BA6NI72 391 aaPredicted RBP4.87□□□□□ -1.63
SRP54-211ENST00000556445 NCF1CA8MVU1 366 aaPredicted RBP4.87□□□□□ -1.63
SRP54-211ENST00000556445 E9PBE3 544 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 SLCO1B7G3V0H7 640 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 IFNL4K9M1U5 179 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 E2F3O00716 465 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 TRAFD1O14545 582 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms