RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 NTNG2Q96CW9 530 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 FBXL20Q96IG2 436 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 ZFP3Q96NJ6 502 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 FAM111AQ96PZ2 611 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 KRT12Q99456 494 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 WWTR1Q9GZV5 400 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 PIGMQ9H3S5 423 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 TEX10Q9NXF1 929 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-219ENST00000556432 GUCA1BQ9UMX6 200 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 CDC7O00311 574 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 SIAH2O43255 324 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 OR10H2O60403 315 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 SH3BGRLO75368 114 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 SMNDC1O75940 238 aaKnown RBP eCLIP12.71□□□□□ -0.37
ACTN1-219ENST00000556432 SNX4O95219 450 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 AHSGP02765 367 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 PGAM1P18669 254 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 SLCO1A2P46721 670 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 HNMTP50135 292 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 FBXW4P57775 412 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 HERVK_113P63132 956 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 ERVK-8P63133 956 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 ZNF267Q14586 743 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-219ENST00000556432 RPS6KA2Q15349 733 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 NHSL2Q5HYW2 709 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 PODNL1Q6PEZ8 512 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 ZNF793Q6ZN11 406 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 VN1R5Q7Z5H4 357 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 YRDCQ86U90 279 aaKnown RBP12.71□□□□□ -0.37
ACTN1-219ENST00000556432 AGGF1Q8N302 714 aaeCLIP12.71□□□□□ -0.37
ACTN1-219ENST00000556432 RNF10Q8N5U6 811 aaKnown RBP12.71□□□□□ -0.37
ACTN1-219ENST00000556432 ACOT4Q8N9L9 421 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 C7orf57Q8NEG2 295 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 ZPLD1Q8TCW7 415 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 TUBA1CQ9BQE3 449 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 ERVK-6Q9BXR3 956 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 GSX2Q9BZM3 304 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 ACBD3Q9H3P7 528 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 PRDM7Q9NQW5 492 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 SLC17A6Q9P2U8 582 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 PACSIN3Q9UKS6 424 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 ERVK-19Q9WJR5 959 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 VWA7Q9Y334 891 aa12.71□□□□□ -0.37
ACTN1-219ENST00000556432 ANKRD33BA6NCL7 494 aa12.7□□□□□ -0.38
ACTN1-219ENST00000556432 NCF1BA6NI72 391 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-219ENST00000556432 NCF1CA8MVU1 366 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-219ENST00000556432 DEFB108AA8MXU0 73 aa12.7□□□□□ -0.38
ACTN1-219ENST00000556432 RTCAO00442 366 aaKnown RBP12.7□□□□□ -0.38
ACTN1-219ENST00000556432 GNB5O14775 395 aa12.7□□□□□ -0.38
ACTN1-219ENST00000556432 TBX6O95947 436 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-219ENST00000556432 NCF1P14598 390 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-219ENST00000556432 PTMSP20962 102 aa12.7□□□□□ -0.38
ACTN1-219ENST00000556432 ATP5A1P25705 553 aaKnown RBP12.7□□□□□ -0.38
ACTN1-219ENST00000556432 SSR2P43308 183 aa12.7□□□□□ -0.38
ACTN1-219ENST00000556432 NAGLUP54802 743 aa12.7□□□□□ -0.38
ACTN1-219ENST00000556432 RPP38P78345 283 aaKnown RBP12.7□□□□□ -0.38
ACTN1-219ENST00000556432 AP5B1Q2VPB7 878 aa12.7□□□□□ -0.38
ACTN1-219ENST00000556432 KBTBD12Q3ZCT8 623 aa12.7□□□□□ -0.38
ACTN1-219ENST00000556432 HLA-DQA1Q5Y7H0 255 aa12.7□□□□□ -0.38
ACTN1-219ENST00000556432 PLXDC2Q6UX71 529 aa12.7□□□□□ -0.38
ACTN1-219ENST00000556432 DGAT2L6Q6ZPD8 337 aa12.7□□□□□ -0.38
ACTN1-219ENST00000556432 SNX31Q8N9S9 440 aa12.7□□□□□ -0.38
ACTN1-219ENST00000556432 SRFBP1Q8NEF9 429 aaKnown RBP12.7□□□□□ -0.38
ACTN1-219ENST00000556432 PPP1R14CQ8TAE6 165 aa12.7□□□□□ -0.38
ACTN1-219ENST00000556432 WFIKKN1Q96NZ8 548 aa12.7□□□□□ -0.38
ACTN1-219ENST00000556432 TBCDQ9BTW9 1192 aa12.7□□□□□ -0.38
ACTN1-219ENST00000556432 PITHD1Q9GZP4 211 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-219ENST00000556432 UBQLN3Q9H347 655 aa12.7□□□□□ -0.38
ACTN1-219ENST00000556432 NT5DC2Q9H857 520 aa12.7□□□□□ -0.38
ACTN1-219ENST00000556432 DSCAMO60469 2012 aa12.7□□□□□ -0.38
ACTN1-219ENST00000556432 MED12Q93074 2177 aa12.7□□□□□ -0.38
ACTN1-219ENST00000556432 A8MXE2 369 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 RCBTB2O95199 551 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 ACTL6AO96019 429 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 TP53P04637 393 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-219ENST00000556432 ALOX15P16050 662 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-219ENST00000556432 SOX18P35713 384 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 MAGEA3P43357 314 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 TMED10P49755 219 aaKnown RBP12.69□□□□□ -0.38
ACTN1-219ENST00000556432 NR1H2P55055 460 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 CDKL1Q00532 357 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 FAM27E3Q08E93 113 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 EBPQ15125 230 aaKnown RBP12.69□□□□□ -0.38
ACTN1-219ENST00000556432 FAM45BPQ6NSW5 357 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 PLEKHM3Q6ZWE6 761 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 GRAMD2AQ8IUY3 354 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 MAPK1IP1LQ8NDC0 245 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 FAM83FQ8NEG4 500 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-219ENST00000556432 FAM45AQ8TCE6 357 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 SPPL2AQ8TCT8 520 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 WNT2BQ93097 391 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 UCN3Q969E3 161 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 ZC3HAV1LQ96H79 300 aaKnown RBP12.69□□□□□ -0.38
ACTN1-219ENST00000556432 PDLIM5Q96HC4 596 aaKnown RBP12.69□□□□□ -0.38
ACTN1-219ENST00000556432 SIGLEC10Q96LC7 697 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 PIGQQ9BRB3 760 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 CAPS2Q9BXY5 557 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 PHACTR1Q9C0D0 580 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 RBSNQ9H1K0 784 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 RPF2Q9H7B2 306 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms