RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 IQCMA0A1B0GVH7 501 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 AXIN1O15169 862 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 KCNK5O95279 499 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 EIF2DP41214 584 aaKnown RBP14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 GUCA1AP43080 201 aaPredicted RBP14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 EMP3P54852 163 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 MC1RQ01726 317 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 PARGQ86W56 976 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 ADAMTS16Q8TE57 1224 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 RSPH9Q9H1X1 276 aaPredicted RBP14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 RANBP3Q9H6Z4 567 aaPredicted RBP14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 J3KTA2 159 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 EDNRAP25101 427 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 LCN1P31025 176 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 PGFP49763 221 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 WNT4P56705 351 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 SF3B4Q15427 424 aaKnown RBP eCLIP14.34□□□□□ -0.113e-6■■□□□ 12
ARHGEF40-207ENST00000556399 PSRC1Q6PGN9 363 aaPredicted RBP14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 PHC2Q8IXK0 858 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 TXNDC15Q96J42 360 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 DEFB118Q96PH6 123 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 TAS2R16Q9NYV7 291 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 TAPBPO15533 448 aa14.33□□□□□ -0.11
ARHGEF40-207ENST00000556399 COQ9O75208 318 aa14.33□□□□□ -0.11
ARHGEF40-207ENST00000556399 CNIH2Q6PI25 160 aa14.33□□□□□ -0.11
ARHGEF40-207ENST00000556399 RBM23Q86U06 439 aaKnown RBP14.33□□□□□ -0.11
ARHGEF40-207ENST00000556399 CCDC116Q8IYX3 515 aa14.33□□□□□ -0.11
ARHGEF40-207ENST00000556399 TMEM145Q8NBT3 493 aa14.33□□□□□ -0.11
ARHGEF40-207ENST00000556399 GTPBP2Q9BX10 602 aaKnown RBP14.33□□□□□ -0.11
ARHGEF40-207ENST00000556399 PCDHGB7Q9Y5F8 929 aa14.33□□□□□ -0.11
ARHGEF40-207ENST00000556399 COL24A1Q17RW2 1714 aa14.33□□□□□ -0.11
ARHGEF40-207ENST00000556399 IGLV3-10A0A075B6K4 115 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 CA12O43570 354 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 PCDHGA12O60330 932 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 AOAHP28039 575 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 PIN1Q13526 163 aaPredicted RBP14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 LACC1Q8IV20 430 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 ECHDC3Q96DC8 303 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 IGSF21Q96ID5 467 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 HYLS1Q96M11 299 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 PPIL3Q9H2H8 161 aaKnown RBP14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 AP1M2Q9Y6Q5 423 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 NFATC1O95644 943 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 LATS1O95835 1130 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 SOD2P04179 222 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 MRPL3P09001 348 aaKnown RBP14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 OR2T33Q8NG76 320 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 MSANTD3Q96H12 275 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 RIPOR3Q96MK2 946 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 RAB11FIP5Q9BXF6 653 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 DNMT3AQ9Y6K1 912 aaPredicted RBP14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 LRRN3E7EW58 273 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 L7N2F9 121 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 M0R233 179 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 ARHGAP33O14559 1287 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 AGR2O95994 175 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 FSHRP23945 695 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 AP2S1P53680 142 aaPredicted RBP14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 TOR1AIP1Q5JTV8 583 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 TMC8Q8IU68 726 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 HMGCLL1Q8TB92 370 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 TRIB2Q92519 343 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 KLK6Q92876 244 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 LMLNQ96KR4 655 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 TTTY10Q9BZA0 68 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 LRRN3Q9H3W5 708 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 FOLH1BQ9HBA9 442 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 FBXO8Q9NRD0 319 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 MAB21L2Q9Y586 359 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 WNT6Q9Y6F9 365 aa14.33□□□□□ -0.12
ARHGEF40-207ENST00000556399 SLC25A12O75746 678 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 BMP8BP34820 402 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 ARFIP1P53367 373 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 TAS2R43P59537 309 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 TSPAN5P62079 268 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 NTRK2Q16620 822 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 ZNF791Q3KP31 576 aaPredicted RBP14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 MORN1Q5T089 497 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 BMP8AQ7Z5Y6 402 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 PJA1Q8NG27 643 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 ASB11Q8WXH4 323 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 MKL2Q9ULH7 1088 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 ZNF879B4DU55 563 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 B3GALT2O43825 422 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 IGLV3-25P01717 112 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 NRIP1P48552 1158 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 BTN3A2P78410 334 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 IRF5Q13568 498 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 INAVAQ3KP66 663 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 LY6G5CQ5SRR4 150 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 ZNF767PQ75MW2 155 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 GID4Q8IVV7 300 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 CD99L2Q8TCZ2 262 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 SYT17Q9BSW7 474 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 C5AR2Q9P296 337 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 LHX3Q9UBR4 397 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 PPIEQ9UNP9 301 aaKnown RBP14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 KLK4Q9Y5K2 254 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 HLA-EP13747 358 aa14.32□□□□□ -0.12
ARHGEF40-207ENST00000556399 CCDC157Q569K6 752 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms