RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 PARGQ86W56 976 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 RNF130Q86XS8 419 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 TRIM48Q8IWZ4 208 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 SAMD14Q8IZD0 417 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-235ENST00000556082 MMP21Q8N119 569 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 CAMKK1Q8N5S9 505 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 AMER3Q8N944 861 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 CAMKVQ8NCB2 501 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 FLCNQ8NFG4 579 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 PNPT1Q8TCS8 783 aaKnown RBP7.84□□□□□ -1.15
ATXN3-235ENST00000556082 SFXN5Q8TD22 340 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 LZICQ8WZA0 190 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 GAL3ST3Q96A11 431 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 CLDN23Q96B33 292 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 MOAP1Q96BY2 351 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 AMDHD1Q96NU7 426 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 ZNF347Q96SE7 839 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 C17orf62Q9BQA9 187 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 ABCG4Q9H172 646 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 CLK4Q9HAZ1 481 aaKnown RBP7.84□□□□□ -1.15
ATXN3-235ENST00000556082 SLAMF7Q9NQ25 335 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 THSD1Q9NS62 852 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 TEX10Q9NXF1 929 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-235ENST00000556082 TUBA8Q9NY65 449 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-235ENST00000556082 ACTR10Q9NZ32 417 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 APOBEC3BQ9UH17 382 aaKnown RBP7.84□□□□□ -1.15
ATXN3-235ENST00000556082 PSME2Q9UL46 239 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 MYRFQ9Y2G1 1151 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 PCDHGB5Q9Y5G0 923 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 PCDHGB3Q9Y5G1 929 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 DOCK9Q9BZ29 2069 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 LOC100289279A0A1B0GTE1 492 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 A0A1W2PR77 199 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 OR6C74A6NCV1 312 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 FAM170BA6NMN3 283 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 A8MVJ9 347 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 M0QX08 132 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 PLOD2O00469 737 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 SCAMP1O15126 338 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 PPM1DO15297 605 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 SLC16A6O15403 523 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 ZSCAN9O15535 394 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-235ENST00000556082 SNAP29O95721 258 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 CLPTM1O96005 669 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 CSF2P04141 144 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 SERPIND1P05546 499 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 TFAP2AP05549 437 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 IFI6P09912 130 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 TFPTP0C1Z6 253 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 CTSEP14091 401 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 NME1P15531 152 aaKnown RBP7.83□□□□□ -1.16
ATXN3-235ENST00000556082 ITGA2P17301 1181 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 FPR1P21462 350 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 ALDH9A1P49189 494 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 CCT3P49368 545 aaKnown RBP7.83□□□□□ -1.16
ATXN3-235ENST00000556082 ANXA11P50995 505 aaKnown RBP7.83□□□□□ -1.16
ATXN3-235ENST00000556082 NR1H2P55055 460 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 DSTNP60981 165 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 RACK1P63244 317 aaKnown RBP7.83□□□□□ -1.16
ATXN3-235ENST00000556082 IL18R1Q13478 541 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 PLCL1Q15111 1095 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 CCDC85BQ15834 202 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-235ENST00000556082 LIN52Q52LA3 116 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 LRRC23Q53EV4 343 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-235ENST00000556082 OTUD3Q5T2D3 398 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-235ENST00000556082 FCRL6Q6DN72 434 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 SLC48A1Q6P1K1 146 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 SPESP1Q6UW49 350 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 TMEM26Q6ZUK4 368 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 TAF8Q7Z7C8 310 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 ARMC8Q8IUR7 673 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 CLEC4FQ8N1N0 589 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 SPEM1Q8N4L4 309 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 ARL10Q8N8L6 244 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 OR8K5Q8NH50 307 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 BAHD1Q8TBE0 780 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-235ENST00000556082 MIPOL1Q8TD10 442 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 ADAMTS16Q8TE57 1224 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 UTP15Q8TED0 518 aaKnown RBP7.83□□□□□ -1.16
ATXN3-235ENST00000556082 SLC37A2Q8TED4 501 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 MAL2Q969L2 176 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 TAMM41Q96BW9 452 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 SERINC2Q96SA4 455 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 EPYCQ99645 322 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 YIPF2Q9BWQ6 316 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 GLIPR2Q9H4G4 154 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 SEMA3GQ9NS98 782 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 FAM118AQ9NWS6 357 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 C2orf42Q9NWW7 574 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 MS4A12Q9NXJ0 267 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 KCMF1Q9P0J7 381 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 NTMQ9P121 344 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 RAPGEFL1Q9UHV5 662 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 PHF11Q9UIL8 331 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 C3orf18Q9UK00 162 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 UTS2RQ9UKP6 389 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 CA14Q9ULX7 337 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 ANGPT4Q9Y264 503 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 ATG4BQ9Y4P1 393 aa7.83□□□□□ -1.16
ATXN3-235ENST00000556082 ATG2BQ96BY7 2078 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms