RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 ANKRD33BA6NCL7 494 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 PCNAP12004 261 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 ALOX15P16050 662 aaPredicted RBP13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 STMN1P16949 149 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 BSGP35613 385 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 SOX18P35713 384 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 KCNJ2P63252 427 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 DUSP8Q13202 625 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 DAZAP2Q15038 168 aaPredicted RBP13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 AP5B1Q2VPB7 878 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 FLYWCH1Q4VC44 716 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 PAGE2BQ5JRK9 111 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 DCST1Q5T197 706 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 GRHL2Q6ISB3 625 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 MED27Q6P2C8 311 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 CYS1Q717R9 158 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 CMC1Q7Z7K0 106 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 GPR180Q86V85 440 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 ST13P4Q8IZP2 240 aaPredicted RBP13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 SLC22A8Q8TCC7 542 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 TANKQ92844 425 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 EXT2Q93063 718 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 MBD6Q96DN6 1003 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 CMTM7Q96FZ5 175 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 ALPK1Q96QP1 1244 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 TIMP4Q99727 224 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 PHACTR1Q9C0D0 580 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 PRDM14Q9GZV8 571 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 ALG9Q9H6U8 611 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 CNIH4Q9P003 139 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 RNF112Q9ULX5 631 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 BOKQ9UMX3 212 aaPredicted RBP13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 TSC22D4Q9Y3Q8 395 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 IKBKGQ9Y6K9 419 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 A0A0A6YYD5 115 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 LRRC14BA6NHZ5 514 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 GLOD5A6NK44 160 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 HSPB2A8KAH6 182 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 EFCAB8A8MWE9 144 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 K7EPI3 171 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 UBXN8O00124 270 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 GPR75O95800 540 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 CT62P0C5K7 136 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 COX7A2P14406 83 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 BMP5P22003 454 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 SSTR4P31391 388 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 UQCRC1P31930 480 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 TIMP3P35625 211 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 ASCL1P50553 236 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 RAB10P61026 200 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 PLIN5Q00G26 463 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 ZNF267Q14586 743 aaPredicted RBP13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 HSPB2Q16082 182 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 CHSY3Q70JA7 882 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 CENPLQ8N0S6 344 aaPredicted RBP13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 FAM13CQ8NE31 585 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 RNASE6Q93091 150 aaKnown RBP13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 TSPAN17Q96FV3 270 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 RBM18Q96H35 190 aaKnown RBP13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 MTERF1Q99551 399 aaKnown RBP13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 CPNE1Q99829 537 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 EXO5Q9H790 373 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 PLEKHF2Q9H8W4 249 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 MS4A12Q9NXJ0 267 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 GRHL1Q9NZI5 618 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 NUDT4Q9NZJ9 180 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 JKAMPQ9P055 326 aa13.15□□□□□ -0.3
CHMP4BP1-201ENST00000556017 HMX2A2RU54 273 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 AHRRA9YTQ3 701 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 PGRMC2O15173 223 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 ATE1O95260 518 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 AIFM1O95831 613 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 HPNP05981 417 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 S1PR1P21453 382 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 GP5P40197 560 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 PIK3CBP42338 1070 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 CDK9P50750 372 aaKnown RBP13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 SLC12A2P55011 1212 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 FBXW4P57775 412 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 RPS13P62277 151 aaKnown RBP13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 TBL3Q12788 808 aaKnown RBP13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 BIKQ13323 160 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 HIST2H2ACQ16777 129 aaPredicted RBP13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 VASNQ6EMK4 673 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 HIST2H2AA3Q6FI13 130 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 DESI1Q6ICB0 168 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 PAMR1Q6UXH9 720 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 DND1Q8IYX4 353 aaKnown RBP13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 ZNF615Q8N8J6 731 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 CHDHQ8NE62 594 aaPredicted RBP13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 FAM222BQ8WU58 562 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 UBE2E3Q969T4 207 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 ADIPOR1Q96A54 375 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 RGMAQ96B86 450 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 RMND5BQ96G75 393 aaPredicted RBP13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 ART5Q96L15 291 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 GAL3ST4Q96RP7 486 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 KRT12Q99456 494 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 DOHHQ9BU89 302 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 ANGPTL4Q9BY76 406 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms