RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 ZNF655Q8N720 491 aaPredicted RBP7.4□□□□□ -1.23
CHD8-209ENST00000555935 OR7G3Q8NG95 312 aa7.4□□□□□ -1.23
CHD8-209ENST00000555935 RBPMSQ93062 196 aaKnown RBP7.4□□□□□ -1.23
CHD8-209ENST00000555935 P2RY13Q9BPV8 354 aa7.4□□□□□ -1.23
CHD8-209ENST00000555935 HDHD2Q9H0R4 259 aa7.4□□□□□ -1.23
CHD8-209ENST00000555935 RERGLQ9H628 205 aa7.4□□□□□ -1.23
CHD8-209ENST00000555935 REEP4Q9H6H4 257 aa7.4□□□□□ -1.23
CHD8-209ENST00000555935 GPBP1L1Q9HC44 474 aaPredicted RBP7.4□□□□□ -1.23
CHD8-209ENST00000555935 PCDH10Q9P2E7 1040 aa7.4□□□□□ -1.23
CHD8-209ENST00000555935 RHCGQ9UBD6 479 aa7.4□□□□□ -1.23
CHD8-209ENST00000555935 ZNF222Q9UK12 451 aa7.4□□□□□ -1.23
CHD8-209ENST00000555935 YARS2Q9Y2Z4 477 aaKnown RBP7.4□□□□□ -1.23
CHD8-209ENST00000555935 CSNK1G3Q9Y6M4 447 aa7.4□□□□□ -1.23
CHD8-209ENST00000555935 SMIM30A4D0T7 59 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 AGAP14A8MT82 685 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 AGRPO00253 132 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 FFAR1O14842 300 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 TLX2O43763 284 aaPredicted RBP7.39□□□□□ -1.23
CHD8-209ENST00000555935 OR10H3O60404 316 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 CD160O95971 181 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 RECKO95980 971 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 HLA-DPB1P04440 258 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 ZDHHC11BP0C7U3 371 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 ACP2P11117 423 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 ZP3P21754 424 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 ELAVL4P26378 380 aaKnown RBP7.39□□□□□ -1.23
CHD8-209ENST00000555935 CCND3P30281 292 aaPredicted RBP7.39□□□□□ -1.23
CHD8-209ENST00000555935 TIA1P31483 386 aaKnown RBP eCLIP7.39□□□□□ -1.23
CHD8-209ENST00000555935 CCR7P32248 378 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 AVPR1BP47901 424 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 DGKGP49619 791 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 RHOAP61586 193 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 COX10Q12887 443 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 RPA4Q13156 261 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 SEC23BQ15437 767 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 CYP27C1Q4G0S4 372 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 ARHGAP15Q53QZ3 475 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 XKR6Q5GH73 641 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 BCL2L15Q5TBC7 163 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 GRHL2Q6ISB3 625 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 CD300LDQ6UXZ3 194 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 DLK2Q6UY11 383 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 ZNF783Q6ZMS7 281 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 RTL4Q6ZR62 310 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 USP45Q70EL2 814 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 DNAJC5GQ8N7S2 189 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 OR11H7Q8NGC8 314 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 APOBEC4Q8WW27 367 aaKnown RBP7.39□□□□□ -1.23
CHD8-209ENST00000555935 RFT1Q96AA3 541 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 OTUB1Q96FW1 271 aaPredicted RBP7.39□□□□□ -1.23
CHD8-209ENST00000555935 ZNF582Q96NG8 517 aaPredicted RBP7.39□□□□□ -1.23
CHD8-209ENST00000555935 MTERF1Q99551 399 aaKnown RBP7.39□□□□□ -1.23
CHD8-209ENST00000555935 MRPL9Q9BYD2 267 aaKnown RBP7.39□□□□□ -1.23
CHD8-209ENST00000555935 SEMA3GQ9NS98 782 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 ZDHHC3Q9NYG2 299 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 TVP23BQ9NYZ1 205 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 NUBP2Q9Y5Y2 271 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 GNG14A0A1W2PPG7 69 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 FAM227AF5H4B4 570 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 GFYI3L273 518 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 TOR1AO14656 332 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 TSPAN4O14817 238 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 KHNYNO15037 678 aaKnown RBP7.39□□□□□ -1.23
CHD8-209ENST00000555935 GPR37L1O60883 481 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 C6orf47O95873 294 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 H1F0P07305 194 aaKnown RBP7.39□□□□□ -1.23
CHD8-209ENST00000555935 PEPDP12955 493 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 CD22P20273 847 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 GALP22466 123 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 HOXD10P28358 340 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 BMP8BP34820 402 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 CHI3L1P36222 383 aaPredicted RBP7.39□□□□□ -1.23
CHD8-209ENST00000555935 CCT3P49368 545 aaKnown RBP7.39□□□□□ -1.23
CHD8-209ENST00000555935 DGKEP52429 567 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 GAS1P54826 345 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 LIM2P55344 173 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 CAV3P56539 151 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 PFN3P60673 137 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 CYP4F8P98187 520 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 DDX39BQ13838 428 aaKnown RBP7.39□□□□□ -1.23
CHD8-209ENST00000555935 FGFBP1Q14512 234 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 RNF219Q5W0B1 726 aaPredicted RBP7.39□□□□□ -1.23
CHD8-209ENST00000555935 PGBD2Q6P3X8 592 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 WDR53Q7Z5U6 358 aaPredicted RBP7.39□□□□□ -1.23
CHD8-209ENST00000555935 BMP8AQ7Z5Y6 402 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 GPR142Q7Z601 462 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 NXPE2Q96DL1 559 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 SENP5Q96HI0 755 aaPredicted RBP7.39□□□□□ -1.23
CHD8-209ENST00000555935 LRR1Q96L50 414 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 PKP4Q99569 1192 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 ARHGAP9Q9BRR9 750 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 WRAP53Q9BUR4 548 aaKnown RBP7.39□□□□□ -1.23
CHD8-209ENST00000555935 DPCDQ9BVM2 203 aaPredicted RBP7.39□□□□□ -1.23
CHD8-209ENST00000555935 GSX2Q9BZM3 304 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 OR51J1Q9H342 316 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 CWH43Q9H720 699 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 CCSER2Q9H7U1 834 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 SLCO1C1Q9NYB5 712 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 COQ3Q9NZJ6 369 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 KIF25Q9UIL4 384 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms