RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 RFXANKO14593 260 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 SCAMP2O15127 329 aaKnown RBP6.47□□□□□ -1.37
SLIRP-204ENST00000555890 ARPC2O15144 300 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 KLK10O43240 276 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 SIGLEC6O43699 453 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 OR1F1O43749 312 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 DFNA5O60443 496 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 NDUFS2O75306 463 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 SH3BGRLO75368 114 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 SLITRK5O94991 958 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 SEMA3DO95025 777 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 SCELO95171 688 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 ETHE1O95571 254 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 IGHV4-34P06331 123 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 GPIP06744 558 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 RNF224P0DH78 156 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 FCGR1AP12314 374 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 CD99P14209 185 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 HOXB6P17509 224 aaKnown RBP6.47□□□□□ -1.37
SLIRP-204ENST00000555890 ATP6V1C1P21283 382 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 PPIBP23284 216 aaKnown RBP6.47□□□□□ -1.37
SLIRP-204ENST00000555890 GSTM2P28161 218 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 CD6P30203 668 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 ACTR1BP42025 376 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 GRIA3P42263 894 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 GSTM5P46439 218 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 MTPNP58546 118 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 ACTR1AP61163 376 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 RAE1P78406 368 aaKnown RBP6.47□□□□□ -1.37
SLIRP-204ENST00000555890 REEP5Q00765 189 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 PLIN5Q00G26 463 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 MEF2AQ02078 507 aaPredicted RBP6.47□□□□□ -1.37
SLIRP-204ENST00000555890 ZNF763Q0D2J5 394 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 ILF3Q12906 894 aaKnown RBP eCLIP6.47□□□□□ -1.37
SLIRP-204ENST00000555890 C4orf46Q504U0 113 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 MTX3Q5HYI7 312 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 CCNYL2Q5T2Q4 361 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 DEPDC1Q5TB30 811 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 KHDRBS2Q5VWX1 349 aaKnown RBP6.47□□□□□ -1.37
SLIRP-204ENST00000555890 GLYATQ6IB77 296 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 OR4F3Q6IEY1 312 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 GCNT7Q6ZNI0 430 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 IKBIPQ70UQ0 350 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 PAGE2Q7Z2X7 111 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 TIPARPQ7Z3E1 657 aaKnown RBP6.47□□□□□ -1.37
SLIRP-204ENST00000555890 COMMD6Q7Z4G1 85 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 ADCK2Q7Z695 626 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 ABI3BPQ7Z7G0 1075 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 SPPL2CQ8IUH8 684 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 TRIM48Q8IWZ4 208 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 METTL4Q8N3J2 472 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 NATD1Q8N6N6 113 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 OR2T12Q8NG77 320 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 OR8J2Q8NGG1 315 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 OR52E1Q8NGJ3 308 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 SVIPQ8NHG7 77 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 ZFPM2Q8WW38 1151 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 LCN9Q8WX39 176 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 GFM2Q969S9 779 aaKnown RBP6.47□□□□□ -1.37
SLIRP-204ENST00000555890 TSACCQ96A04 125 aaPredicted RBP6.47□□□□□ -1.37
SLIRP-204ENST00000555890 RGMAQ96B86 450 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 SLC22A18Q96BI1 424 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 PPWD1Q96BP3 646 aaKnown RBP6.47□□□□□ -1.37
SLIRP-204ENST00000555890 FAM120BQ96EK7 910 aaKnown RBP6.47□□□□□ -1.37
SLIRP-204ENST00000555890 C11orf24Q96F05 449 aaPredicted RBP6.47□□□□□ -1.37
SLIRP-204ENST00000555890 PDXPQ96GD0 296 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 COX4I2Q96KJ9 171 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 EGLN2Q96KS0 407 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 PRAP1Q96NZ9 151 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 PANX1Q96RD7 426 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 ZNF184Q99676 751 aaPredicted RBP6.47□□□□□ -1.37
SLIRP-204ENST00000555890 DUSP26Q9BV47 211 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 GPR174Q9BXC1 333 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 GSDMCQ9BYG8 508 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 REXO4Q9GZR2 422 aaKnown RBP6.47□□□□□ -1.37
SLIRP-204ENST00000555890 PAIP1Q9H074 479 aaKnown RBP6.47□□□□□ -1.37
SLIRP-204ENST00000555890 MRPL18Q9H0U6 180 aaKnown RBP6.47□□□□□ -1.37
SLIRP-204ENST00000555890 SLC25A18Q9H1K4 315 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 PCED1AQ9H1Q7 454 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 OR51B5Q9H339 312 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 XKR8Q9H6D3 395 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 REEP4Q9H6H4 257 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 C6orf106Q9H6K1 298 aaPredicted RBP6.47□□□□□ -1.37
SLIRP-204ENST00000555890 COPS7BQ9H9Q2 264 aaPredicted RBP6.47□□□□□ -1.37
SLIRP-204ENST00000555890 MRPS30Q9NP92 439 aaKnown RBP6.47□□□□□ -1.37
SLIRP-204ENST00000555890 EMC7Q9NPA0 242 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 MYNNQ9NPC7 610 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 CD93Q9NPY3 652 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 GPR27Q9NS67 375 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 CCM2LQ9NUG4 571 aaPredicted RBP6.47□□□□□ -1.37
SLIRP-204ENST00000555890 ARMC1Q9NVT9 282 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 WSB2Q9NYS7 404 aaPredicted RBP6.47□□□□□ -1.37
SLIRP-204ENST00000555890 OR6C2Q9NZP2 312 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 ATP6V1HQ9UI12 483 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 BTNL2Q9UIR0 455 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 ANAPC2Q9UJX6 822 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 PNMA8BQ9ULN7 279 aaPredicted RBP6.47□□□□□ -1.37
SLIRP-204ENST00000555890 PCDHGB4Q9UN71 923 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 CORO2BQ9UQ03 480 aa6.47□□□□□ -1.37
SLIRP-204ENST00000555890 CA5BQ9Y2D0 317 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms