RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 STAT5AP42229 794 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 STT3AP46977 705 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 ID4P47928 161 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 HNRNPFP52597 415 aaKnown RBP10.51□□□□□ -0.73
SHMT2-220ENST00000555634 EMP2P54851 167 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 AP2B1P63010 937 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 TXNL4AP83876 142 aaKnown RBP10.51□□□□□ -0.73
SHMT2-220ENST00000555634 BNIP1Q12981 228 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 ZNHIT3Q15649 155 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-220ENST00000555634 ELAVL1Q15717 326 aaKnown RBP10.51□□□□□ -0.73
SHMT2-220ENST00000555634 NKG7Q16617 165 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 ZNF385CQ66K41 422 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-220ENST00000555634 FAM198BQ6UWH4 519 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 C6orf89Q6UWU4 347 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 TMEM64Q6YI46 380 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 BNC2Q6ZN30 1099 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-220ENST00000555634 RIPOR1Q6ZS17 1223 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 ZNF621Q6ZSS3 439 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 COX15Q7KZN9 410 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 RAB43Q86YS6 212 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 FUNDC1Q8IVP5 155 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 SCUBE1Q8IWY4 988 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 PGAM4Q8N0Y7 254 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 MMP21Q8N119 569 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 VWA5B2Q8N398 1253 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 DTWD1Q8N5C7 304 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 DPP10Q8N608 796 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 ENDOVQ8N8Q3 282 aaKnown RBP10.51□□□□□ -0.73
SHMT2-220ENST00000555634 SLC38A9Q8NBW4 561 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 TNIP2Q8NFZ5 429 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 OR2Y1Q8NGV0 311 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 OR14A16Q8NHC5 309 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 RIT1Q92963 219 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 PMEPA1Q969W9 287 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 CNRIP1Q96F85 164 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-220ENST00000555634 AMDHD1Q96NU7 426 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 MS4A4EQ96PG1 132 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 RAB3IPQ96QF0 476 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-220ENST00000555634 SLC35A5Q9BS91 424 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 ALOXE3Q9BYJ1 711 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 C1orf21Q9H246 121 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 IL1RL2Q9HB29 575 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 PTGFRNQ9P2B2 879 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 CROTQ9UKG9 612 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 CFL2Q9Y281 166 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 MAN2B2Q9Y2E5 1009 aa10.51□□□□□ -0.73
SHMT2-220ENST00000555634 PTPRZ1P23471 2315 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-220ENST00000555634 CACNA1BQ00975 2339 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 CDRT15L2A8MXV6 281 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 PRAMEF2O60811 474 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 ALOX12BO75342 701 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 GMNNO75496 209 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 ZCCHC18P0CG32 403 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 UQCRC2P22695 453 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 FRKP42685 505 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-220ENST00000555634 MAGEA8P43361 318 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 PRIM2P49643 509 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 KHKP50053 298 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 PGDP52209 483 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 PCBP4P57723 403 aaKnown RBP10.5□□□□□ -0.73
SHMT2-220ENST00000555634 OR4D2P58180 307 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 IGLV3-21P80748 117 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-220ENST00000555634 HPCAP84074 193 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 ID2Q02363 134 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 DNASE1L3Q13609 305 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 CEBPEQ15744 281 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 ZNF385BQ569K4 471 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 VWA2Q5GFL6 755 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 LRIF1Q5T3J3 769 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 MRPL14Q6P1L8 145 aaKnown RBP10.5□□□□□ -0.73
SHMT2-220ENST00000555634 TMEM107Q6UX40 140 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 OR4N5Q8IXE1 308 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 CCDC116Q8IYX3 515 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 CLECL1Q8IZS7 167 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 OR8J3Q8NGG0 315 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 OR9A2Q8NGT5 310 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 ZNF675Q8TD23 568 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 CT55Q8WUE5 264 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 GTF2H4Q92759 462 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 LRRC58Q96CX6 371 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 RNF31Q96EP0 1072 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 SLC45A3Q96JT2 553 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 SLC35G5Q96KT7 338 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 IP6K3Q96PC2 410 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 LPAR4Q99677 370 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 CNPPD1Q9BV87 410 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 VN1R1Q9GZP7 353 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 GPN2Q9H9Y4 310 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-220ENST00000555634 CACYBPQ9HB71 228 aaKnown RBP10.5□□□□□ -0.73
SHMT2-220ENST00000555634 PNO1Q9NRX1 252 aaKnown RBP10.5□□□□□ -0.73
SHMT2-220ENST00000555634 LANCL2Q9NS86 450 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 ZCCHC3Q9NUD5 404 aaKnown RBP10.5□□□□□ -0.73
SHMT2-220ENST00000555634 THUMPD1Q9NXG2 353 aaKnown RBP10.5□□□□□ -0.73
SHMT2-220ENST00000555634 ACSL6Q9UKU0 697 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 CES1P1Q9UKY3 287 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 PRPF19Q9UMS4 504 aaKnown RBP10.5□□□□□ -0.73
SHMT2-220ENST00000555634 FAF1Q9UNN5 650 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-220ENST00000555634 EXO1Q9UQ84 846 aaKnown RBP10.5□□□□□ -0.73
SHMT2-220ENST00000555634 NEUROG3Q9Y4Z2 214 aa10.5□□□□□ -0.73
SHMT2-220ENST00000555634 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms