RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 OR52E8Q6IFG1 317 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 SLC15A3Q8IY34 581 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 OR9A2Q8NGT5 310 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 PPWD1Q96BP3 646 aaKnown RBP10.1□□□□□ -0.79
TDP1-211ENST00000555178 ZNF681Q96N22 645 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 AMDHD1Q96NU7 426 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 ANKRD27Q96NW4 1050 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 NPLQ9BXD5 320 aaPredicted RBP10.1□□□□□ -0.79
TDP1-211ENST00000555178 POLR1BQ9H9Y6 1135 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 SPAG4Q9NPE6 437 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 SIRT3Q9NTG7 399 aaPredicted RBP10.1□□□□□ -0.79
TDP1-211ENST00000555178 GID8Q9NWU2 228 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 EHD3Q9NZN3 535 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 AKAP7Q9P0M2 348 aaPredicted RBP10.1□□□□□ -0.79
TDP1-211ENST00000555178 SLC7A8Q9UHI5 535 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 BTNL2Q9UIR0 455 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 RRP15Q9Y3B9 282 aaKnown RBP10.1□□□□□ -0.79
TDP1-211ENST00000555178 SNX8Q9Y5X2 465 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 CACNA1AO00555 2505 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 MED13Q9UHV7 2174 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 TMX2-CTNND1H3BSU7 103 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 MASP2O00187 686 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 NVLO15381 856 aaKnown RBP10.1□□□□□ -0.79
TDP1-211ENST00000555178 CDK4P11802 303 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 RNH1P13489 461 aaKnown RBP10.1□□□□□ -0.79
TDP1-211ENST00000555178 SOAT1P35610 550 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 MANFP55145 182 aaKnown RBP10.1□□□□□ -0.79
TDP1-211ENST00000555178 PIGGQ5H8A4 983 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 ANXA8L1Q5VT79 327 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 ZNF517Q6ZMY9 492 aaPredicted RBP10.1□□□□□ -0.79
TDP1-211ENST00000555178 MSANTD1Q6ZTZ1 278 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 LANCL3Q6ZV70 420 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 MR1Q95460 341 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 BBS4Q96RK4 519 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 CPPED1Q9BRF8 314 aaPredicted RBP10.1□□□□□ -0.79
TDP1-211ENST00000555178 DDA1Q9BW61 102 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 SCNM1Q9BWG6 230 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 MS4A12Q9NXJ0 267 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 TAS2R7Q9NYW3 318 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 TMEM181Q9P2C4 612 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 SRPK3Q9UPE1 567 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 MAPRE3Q9UPY8 281 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 ENTPD4Q9Y227 616 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 MAP4K5Q9Y4K4 846 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 CHD8Q9HCK8 2581 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 TRABD2BA6NFA1 517 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 CDRT15L2A8MXV6 281 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 MYO1GB0I1T2 1018 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 HRKO00198 91 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 TLX1P31314 330 aaPredicted RBP10.09□□□□□ -0.79
TDP1-211ENST00000555178 XKP51811 444 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 DCDP81605 110 aaKnown RBP10.09□□□□□ -0.79
TDP1-211ENST00000555178 MRPS35P82673 323 aaKnown RBP10.09□□□□□ -0.79
TDP1-211ENST00000555178 NKG7Q16617 165 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 RUNDC3AQ59EK9 446 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 MRPL14Q6P1L8 145 aaKnown RBP10.09□□□□□ -0.79
TDP1-211ENST00000555178 TMEM107Q6UX40 140 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 IFNEQ86WN2 208 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 STT3BQ8TCJ2 826 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 KAT2AQ92830 837 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 TBC1D20Q96BZ9 403 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 ZNF764Q96H86 408 aaPredicted RBP10.09□□□□□ -0.79
TDP1-211ENST00000555178 MAGED4Q96JG8 741 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 SPSB2Q99619 263 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 TAS2R9Q9NYW1 312 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 ABCD2Q9UBJ2 740 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 PCDHGA3Q9Y5H0 932 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 MRPS18BQ9Y676 258 aaKnown RBP10.09□□□□□ -0.79
TDP1-211ENST00000555178 SPACA6W5XKT8 324 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 MGAQ8IWI9 3026 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 APC2O95996 2303 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 IGF2RP11717 2491 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 DOCK10Q96BY6 2186 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 IGHV3-20A0A0C4DH32 117 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 BRINP1O60477 761 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 ERN1O75460 977 aaKnown RBP10.09□□□□□ -0.79
TDP1-211ENST00000555178 FHP07954 510 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 PCSK2P16519 638 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 NTSP30990 170 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 RAB15P59190 212 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 RPS26P62854 115 aaKnown RBP10.09□□□□□ -0.79
TDP1-211ENST00000555178 RHAGQ02094 409 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 SLC13A2Q13183 592 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 COX20Q5RI15 118 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 PRMT9Q6P2P2 845 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 PGM2L1Q6PCE3 622 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 OVCH1Q7RTY7 1134 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 SZRD1Q7Z422 152 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 BPHLQ86WA6 291 aaPredicted RBP10.09□□□□□ -0.79
TDP1-211ENST00000555178 SCUBE1Q8IWY4 988 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 CACTIN-AS1Q8N1I8 211 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 GALNT15Q8N3T1 639 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 FAM13CQ8NE31 585 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 VPS37AQ8NEZ2 397 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 OR4K14Q8NGD5 310 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 CT55Q8WUE5 264 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 WDR60Q8WVS4 1066 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 MVB12AQ96EY5 273 aa10.09□□□□□ -0.79
TDP1-211ENST00000555178 ZBED6CLQ96FA7 236 aaPredicted RBP10.09□□□□□ -0.79
TDP1-211ENST00000555178 OTUB1Q96FW1 271 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms