RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 DOK4Q8TEW6 326 aa12.01□□□□□ -0.49
MTHFD1-208ENST00000554739 THAP3Q8WTV1 239 aaPredicted RBP12.01□□□□□ -0.49
MTHFD1-208ENST00000554739 TWIST2Q8WVJ9 160 aa12.01□□□□□ -0.49
MTHFD1-208ENST00000554739 FBXL20Q96IG2 436 aa12.01□□□□□ -0.49
MTHFD1-208ENST00000554739 ZNF681Q96N22 645 aa12.01□□□□□ -0.49
MTHFD1-208ENST00000554739 UTP23Q9BRU9 249 aaKnown RBP12.01□□□□□ -0.49
MTHFD1-208ENST00000554739 EBPLQ9BY08 206 aa12.01□□□□□ -0.49
MTHFD1-208ENST00000554739 C20orf27Q9GZN8 174 aa12.01□□□□□ -0.49
MTHFD1-208ENST00000554739 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.01□□□□□ -0.49
MTHFD1-208ENST00000554739 CXorf21Q9HAI6 301 aa12.01□□□□□ -0.49
MTHFD1-208ENST00000554739 ARGLU1Q9NWB6 273 aaPredicted RBP12.01□□□□□ -0.49
MTHFD1-208ENST00000554739 C1orf109Q9NX04 203 aa12.01□□□□□ -0.49
MTHFD1-208ENST00000554739 PSME2Q9UL46 239 aa12.01□□□□□ -0.49
MTHFD1-208ENST00000554739 WBP11Q9Y2W2 641 aaKnown RBP12.01□□□□□ -0.49
MTHFD1-208ENST00000554739 SCN2AQ99250 2005 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 TRAV17A0A0B4J275 112 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 GABRR3A8MPY1 467 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 J3QKU1 62 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 PIP5K1BO14986 540 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 DYRK3O43781 588 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 HSPA4LO95757 839 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 NEFHP12036 1026 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 CSNK2A2P19784 350 aaPredicted RBP12□□□□□ -0.49
MTHFD1-208ENST00000554739 BGNP21810 368 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 FEN1P39748 380 aaKnown RBP12□□□□□ -0.49
MTHFD1-208ENST00000554739 GSTM5P46439 218 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 ALDH9A1P49189 494 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 ABCE1P61221 599 aaKnown RBP12□□□□□ -0.49
MTHFD1-208ENST00000554739 FOXK1P85037 733 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 MGAT2Q10469 447 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 ZNF267Q14586 743 aaPredicted RBP12□□□□□ -0.49
MTHFD1-208ENST00000554739 HEPACAMQ14CZ8 416 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 IGFBP7Q16270 282 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 RFTN2Q52LD8 501 aaPredicted RBP12□□□□□ -0.49
MTHFD1-208ENST00000554739 PRR30Q53SZ7 412 aaPredicted RBP12□□□□□ -0.49
MTHFD1-208ENST00000554739 SPINK14Q6IE38 97 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 C16orf47Q6ZP98 133 aaPredicted RBP12□□□□□ -0.49
MTHFD1-208ENST00000554739 DDIASQ8IXT1 998 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 PIAS4Q8N2W9 510 aaPredicted RBP12□□□□□ -0.49
MTHFD1-208ENST00000554739 CPT1CQ8TCG5 803 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 SNRNP40Q96DI7 357 aaKnown RBP12□□□□□ -0.49
MTHFD1-208ENST00000554739 C19orf60Q96EN9 201 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 CNRIP1Q96F85 164 aaPredicted RBP12□□□□□ -0.49
MTHFD1-208ENST00000554739 FCRL1Q96LA6 429 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 SIGLEC12Q96PQ1 595 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 BARD1Q99728 777 aaKnown RBP12□□□□□ -0.49
MTHFD1-208ENST00000554739 PAIP2Q9BPZ3 127 aaKnown RBP12□□□□□ -0.49
MTHFD1-208ENST00000554739 TRIM4Q9C037 500 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 TRIM45Q9H8W5 580 aaPredicted RBP12□□□□□ -0.49
MTHFD1-208ENST00000554739 VIPAS39Q9H9C1 493 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 LIN28AQ9H9Z2 209 aaKnown RBP12□□□□□ -0.49
MTHFD1-208ENST00000554739 LRTM1Q9HBL6 345 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 ANKRD10Q9NXR5 420 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 ABI3Q9P2A4 366 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 MYOTQ9UBF9 498 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 COPS7AQ9UBW8 275 aa12□□□□□ -0.49
MTHFD1-208ENST00000554739 EXO1Q9UQ84 846 aaKnown RBP12□□□□□ -0.49
MTHFD1-208ENST00000554739 EPB41L3Q9Y2J2 1087 aaPredicted RBP12□□□□□ -0.49
MTHFD1-208ENST00000554739 POLR3HQ9Y535 204 aaPredicted RBP12□□□□□ -0.49
MTHFD1-208ENST00000554739 RP1L1Q8IWN7 2480 aaPredicted RBP12□□□□□ -0.49
MTHFD1-208ENST00000554739 LSM1O15116 133 aaKnown RBP11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 PRAMEF2O60811 474 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 ITGA10O75578 1167 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 ERAL1O75616 437 aaKnown RBP11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 NEURL1O76050 574 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 SNUPNO95149 360 aaKnown RBP11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 CLPSP04118 112 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 ATP1B1P05026 303 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 DDCP20711 480 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 S1PR1P21453 382 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 TACR1P25103 407 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 SLC1A6P48664 564 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 HLCSP50747 726 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 ERVK-8P63133 956 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 DUSP2Q05923 314 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 ZNF763Q0D2J5 394 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 C2orf80Q0P641 193 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 BST1Q10588 318 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 FUT7Q11130 342 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 STX3Q13277 289 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 NR6A1Q15406 480 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 OR1C1Q15619 314 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 PRSS53Q2L4Q9 553 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 XKR7Q5GH72 579 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 FAM71E1Q6IPT2 247 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 RPUSD3Q6P087 351 aaKnown RBP11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 FAM180BQ6P0A1 224 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 ZNF227Q86WZ6 799 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 ZNF781Q8N8C0 355 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 MDS2Q8NDY4 140 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 OR5L2Q8NGL0 311 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 MIB2Q96AX9 1013 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 KLHL29Q96CT2 875 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 ART5Q96L15 291 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 ATP6V1G3Q96LB4 118 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 C3orf30Q96M34 536 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 SORT1Q99523 831 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 CCT7Q99832 543 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 SH3GL2Q99962 352 aa11.99□□□□□ -0.49
MTHFD1-208ENST00000554739 CNPPD1Q9BV87 410 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms