RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 HAT1O14929 419 aa13.92□□□□□ -0.18
PPP4R3A-201ENST00000554308 TBX6O95947 436 aaPredicted RBP13.92□□□□□ -0.18
PPP4R3A-201ENST00000554308 HSD17B2P37059 387 aa13.92□□□□□ -0.18
PPP4R3A-201ENST00000554308 TUBA1BP68363 451 aa13.92□□□□□ -0.18
PPP4R3A-201ENST00000554308 CCINQ13939 588 aa13.92□□□□□ -0.18
PPP4R3A-201ENST00000554308 THOC7Q6I9Y2 204 aaKnown RBP13.92□□□□□ -0.18
PPP4R3A-201ENST00000554308 USP43Q70EL4 1123 aa13.92□□□□□ -0.18
PPP4R3A-201ENST00000554308 TUBA1AQ71U36 451 aa13.92□□□□□ -0.18
PPP4R3A-201ENST00000554308 VASH1Q7L8A9 365 aaPredicted RBP13.92□□□□□ -0.18
PPP4R3A-201ENST00000554308 TSEN54Q7Z6J9 526 aaKnown RBP13.92□□□□□ -0.18
PPP4R3A-201ENST00000554308 SERPINA11Q86U17 422 aa13.92□□□□□ -0.18
PPP4R3A-201ENST00000554308 C16orf78Q8WTQ4 265 aa13.92□□□□□ -0.18
PPP4R3A-201ENST00000554308 TPT1P8Q9HAU6 139 aa13.92□□□□□ -0.18
PPP4R3A-201ENST00000554308 KLHL20Q9Y2M5 609 aa13.92□□□□□ -0.18
PPP4R3A-201ENST00000554308 UGT2A1Q9Y4X1 527 aa13.92□□□□□ -0.18
PPP4R3A-201ENST00000554308 SAGE2PA6NJ88 616 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 RRM2P31350 389 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 IDH2P48735 452 aaKnown RBP13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 ITGA1P56199 1179 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 COL9A2Q14055 689 aaPredicted RBP13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 RPE65Q16518 533 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 EOGTQ5NDL2 527 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 NXNL2Q5VZ03 156 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 DNAJC22Q8N4W6 341 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 IL17RDQ8NFM7 739 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 OR2A1Q8NGT9 310 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 OR52J3Q8NH60 311 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 ZNF675Q8TD23 568 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 TP53INP1Q96A56 240 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 HRASLS5Q96KN8 279 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 SDHCQ99643 169 aaPredicted RBP13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 ROGDIQ9GZN7 287 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 TMEM168Q9H0V1 697 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 REEP4Q9H6H4 257 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 ANKHQ9HCJ1 492 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 TRPV5Q9NQA5 729 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 ERVK13-1Q9NX77 482 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 PCDHGB6Q9Y5F9 930 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 IGKV1-8A0A0C4DH67 115 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 SHISA7A6NL88 538 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 E9PQ18 207 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 AGRPO00253 132 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 PLPP1O14494 284 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 CCNKO75909 580 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 KLHL18O94889 574 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 PTTG1O95997 202 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 C9P02748 559 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 IL3P08700 152 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 CBLL1Q75N03 491 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 TMEM145Q8NBT3 493 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 OR4E2Q8NGC2 313 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 OR4A15Q8NGL6 344 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 C7orf34Q96L11 122 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 OR2M4Q96R27 311 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 FEVQ99581 238 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 KCNS3Q9BQ31 491 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 NDEL1Q9GZM8 345 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 NXF2Q9GZY0 626 aaKnown RBP13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 PCBD2Q9H0N5 130 aa13.91□□□□□ -0.18
PPP4R3A-201ENST00000554308 CTDSP2O14595 271 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 PPM1DO15297 605 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 RASGRP1O95267 797 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 ADORA3P0DMS8 318 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 HOXB3P14651 431 aaPredicted RBP13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 PCSK2P16519 638 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 HBA1P69905 142 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 PRDX1Q06830 199 aaKnown RBP13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 C10orf62Q5T681 223 aaPredicted RBP13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 TUBA3EQ6PEY2 450 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 MSANTD1Q6ZTZ1 278 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 EIF3MQ7L2H7 374 aaKnown RBP13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 SLC9B2Q86UD5 537 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 CYP4Z2PQ8N1L4 340 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 AMER2Q8N7J2 671 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 PPCDCQ96CD2 204 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 COQ8BQ96D53 544 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 SPHK1Q9NYA1 384 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 SNX8Q9Y5X2 465 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 LRRC72A6NJI9 287 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 TMEM229AB2RXF0 380 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 C6orf47O95873 294 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 OPN1SWP03999 348 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 RPLP0P05388 317 aaKnown RBP13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 CDK1P06493 297 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 HNRNPA2B1P22626 353 aaKnown RBP13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 CXCR2P25025 360 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 S100A5P33763 92 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 ACTR1BP42025 376 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 ALDH9A1P49189 494 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 ACTR1AP61163 376 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 KCNJ10P78508 379 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 GAB1Q13480 694 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 COL19A1Q14993 1142 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 TBCEQ15813 527 aaPredicted RBP13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 CYP27C1Q4G0S4 372 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 ARMCX4Q5H9R4 360 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 KHDRBS2Q5VWX1 349 aaKnown RBP13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 GATAD2AQ86YP4 633 aa13.9□□□□□ -0.18
PPP4R3A-201ENST00000554308 SLC5A8Q8N695 610 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms