RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 NQO2P16083 231 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 NAGAP17050 411 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 GSTM3P21266 225 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 IL32P24001 234 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 FCARP24071 287 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 FPR3P25089 353 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 ACKR3P25106 362 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 OTX1P32242 354 aaPredicted RBP3.88□□□□□ -1.79
USP44-208ENST00000552440 PTGER4P35408 488 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 RPL21P46778 160 aaKnown RBP3.88□□□□□ -1.79
USP44-208ENST00000552440 FHITP49789 147 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 MMP15P51511 669 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 IST1P53990 364 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 CLDN15P56746 228 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 KCNK10P57789 538 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 SULT2A1Q06520 285 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 ZFP36L1Q07352 338 aaKnown RBP3.88□□□□□ -1.79
USP44-208ENST00000552440 CRYZQ08257 329 aaKnown RBP3.88□□□□□ -1.79
USP44-208ENST00000552440 ILF2Q12905 390 aaKnown RBP3.88□□□□□ -1.79
USP44-208ENST00000552440 GRIK2Q13002 908 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 GPS2Q13227 327 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 NME3Q13232 169 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 ILKQ13418 452 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 RGS21Q2M5E4 152 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 ANXA2RQ3ZCQ2 193 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 RNASE12Q5GAN4 147 aaKnown RBP3.88□□□□□ -1.79
USP44-208ENST00000552440 C6orf226Q5I0X4 101 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 EPHA10Q5JZY3 1008 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 SAPCD1Q5SSQ6 148 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 RGMBQ6NW40 437 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 SCYL2Q6P3W7 929 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 ZNF534Q76KX8 674 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 SSX9Q7RTT3 188 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 CHSY1Q86X52 802 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 TGIF2LXQ8IUE1 241 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 RBM45Q8IUH3 476 aaKnown RBP3.88□□□□□ -1.79
USP44-208ENST00000552440 CROCCP3Q8IVE0 287 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 SELENOHQ8IZQ5 122 aaKnown RBP3.88□□□□□ -1.79
USP44-208ENST00000552440 TMEM123Q8N131 208 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 PQLC3Q8N755 202 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 SYT14Q8NB59 555 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 DTX3LQ8TDB6 740 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 GLYATL1Q969I3 302 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 ADIPOR1Q96A54 375 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 TMEM45BQ96B21 275 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 PYCR2Q96C36 320 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 RAB39BQ96DA2 213 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 CERS2Q96G23 380 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 HPDLQ96IR7 371 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 LMLNQ96KR4 655 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 ZNF570Q96NI8 536 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 THAP7Q9BT49 309 aaPredicted RBP3.88□□□□□ -1.79
USP44-208ENST00000552440 UPF3BQ9BZI7 483 aaKnown RBP3.88□□□□□ -1.79
USP44-208ENST00000552440 API5Q9BZZ5 524 aaKnown RBP3.88□□□□□ -1.79
USP44-208ENST00000552440 SPRTNQ9H040 489 aaPredicted RBP3.88□□□□□ -1.79
USP44-208ENST00000552440 RAB1BQ9H0U4 201 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 ELOVL6Q9H5J4 265 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 UBTD1Q9HAC8 227 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 MCCC2Q9HCC0 563 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 CSNK1G1Q9HCP0 422 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 LYRM4Q9HD34 91 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 DUSP22Q9NRW4 184 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 C20orf96Q9NUD7 363 aaPredicted RBP3.88□□□□□ -1.79
USP44-208ENST00000552440 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.88□□□□□ -1.79
USP44-208ENST00000552440 UFSP2Q9NUQ7 469 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 GAR1Q9NY12 217 aaKnown RBP3.88□□□□□ -1.79
USP44-208ENST00000552440 NKIRAS1Q9NYS0 192 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 STOX2Q9P2F5 926 aaPredicted RBP3.88□□□□□ -1.79
USP44-208ENST00000552440 SLC9A2Q9UBY0 812 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 ADAM28Q9UKQ2 775 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 ZNF490Q9ULM2 529 aaPredicted RBP3.88□□□□□ -1.79
USP44-208ENST00000552440 RNF115Q9Y4L5 304 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 STON1Q9Y6Q2 735 aa3.88□□□□□ -1.79
USP44-208ENST00000552440 TARBP1Q13395 1621 aaKnown RBP3.88□□□□□ -1.79
USP44-208ENST00000552440 SPATA31A6Q5VVP1 1343 aa3.87□□□□□ -1.79
USP44-208ENST00000552440 ATXN2Q99700 1313 aaKnown RBP3.87□□□□□ -1.79
USP44-208ENST00000552440 SNAPC4Q5SXM2 1469 aa3.87□□□□□ -1.79
USP44-208ENST00000552440 TRAV24A0A0B4J272 114 aa3.87□□□□□ -1.79
USP44-208ENST00000552440 A0A1B0GVL5 298 aa3.87□□□□□ -1.79
USP44-208ENST00000552440 LOC390937A0A1W2PQ73 354 aa3.87□□□□□ -1.79
USP44-208ENST00000552440 TMEM210A6NLX4 147 aa3.87□□□□□ -1.79
USP44-208ENST00000552440 WASHC1A8K0Z3 465 aa3.87□□□□□ -1.79
USP44-208ENST00000552440 TMEM150CB9EJG8 249 aa3.87□□□□□ -1.79
USP44-208ENST00000552440 E7ENQ6 273 aa3.87□□□□□ -1.79
USP44-208ENST00000552440 PDLIM1O00151 329 aa3.87□□□□□ -1.79
USP44-208ENST00000552440 CLDN5O00501 218 aa3.87□□□□□ -1.79
USP44-208ENST00000552440 KCNN4O15554 427 aa3.87□□□□□ -1.79
USP44-208ENST00000552440 RBBP9O75884 186 aa3.87□□□□□ -1.79
USP44-208ENST00000552440 SCGNO76038 276 aa3.87□□□□□ -1.79
USP44-208ENST00000552440 PDE5AO76074 875 aa3.87□□□□□ -1.79
USP44-208ENST00000552440 DDNO94850 711 aaPredicted RBP3.87□□□□□ -1.79
USP44-208ENST00000552440 TMCC1O94876 653 aa3.87□□□□□ -1.79
USP44-208ENST00000552440 CST1P01037 141 aa3.87□□□□□ -1.79
USP44-208ENST00000552440 ANXA4P09525 319 aaPredicted RBP3.87□□□□□ -1.79
USP44-208ENST00000552440 ENGP17813 658 aa3.87□□□□□ -1.79
USP44-208ENST00000552440 OXTRP30559 389 aa3.87□□□□□ -1.79
USP44-208ENST00000552440 NR0B1P51843 470 aaKnown RBP3.87□□□□□ -1.79
USP44-208ENST00000552440 NFATC2Q13469 925 aa3.87□□□□□ -1.79
USP44-208ENST00000552440 VEZF1Q14119 521 aa3.87□□□□□ -1.79
USP44-208ENST00000552440 DGCR6Q14129 220 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms