RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 FAM27E3Q08E93 113 aa13.93□□□□□ -0.18
CACNB3-220ENST00000551716 PDAP1Q13442 181 aaKnown RBP13.93□□□□□ -0.18
CACNB3-220ENST00000551716 CAPRIN1Q14444 709 aaKnown RBP13.93□□□□□ -0.18
CACNB3-220ENST00000551716 RPS6KA2Q15349 733 aa13.93□□□□□ -0.18
CACNB3-220ENST00000551716 EIPR1Q53HC9 387 aa13.93□□□□□ -0.18
CACNB3-220ENST00000551716 HSP90AA5PQ58FG0 334 aa13.93□□□□□ -0.18
CACNB3-220ENST00000551716 SLCO4C1Q6ZQN7 724 aa13.93□□□□□ -0.18
CACNB3-220ENST00000551716 ADGRE4PQ86SQ3 457 aa13.93□□□□□ -0.18
CACNB3-220ENST00000551716 KIAA1328Q86T90 577 aa13.93□□□□□ -0.18
CACNB3-220ENST00000551716 IGFBPL1Q8WX77 278 aa13.93□□□□□ -0.18
CACNB3-220ENST00000551716 ANKRD9Q96BM1 317 aaPredicted RBP13.93□□□□□ -0.18
CACNB3-220ENST00000551716 PDLIM5Q96HC4 596 aaKnown RBP13.93□□□□□ -0.18
CACNB3-220ENST00000551716 KCNC2Q96PR1 638 aa13.93□□□□□ -0.18
CACNB3-220ENST00000551716 GAL3ST4Q96RP7 486 aa13.93□□□□□ -0.18
CACNB3-220ENST00000551716 NDNQ99608 321 aa13.93□□□□□ -0.18
CACNB3-220ENST00000551716 TUBA1CQ9BQE3 449 aa13.93□□□□□ -0.18
CACNB3-220ENST00000551716 REG4Q9BYZ8 158 aa13.93□□□□□ -0.18
CACNB3-220ENST00000551716 XAB2Q9HCS7 855 aaKnown RBP13.93□□□□□ -0.18
CACNB3-220ENST00000551716 PRDM7Q9NQW5 492 aa13.93□□□□□ -0.18
CACNB3-220ENST00000551716 TCRBV7S3A2A0A539 114 aa13.92□□□□□ -0.18
CACNB3-220ENST00000551716 RNF223E7ERA6 249 aa13.92□□□□□ -0.18
CACNB3-220ENST00000551716 LRATO95237 230 aa13.92□□□□□ -0.18
CACNB3-220ENST00000551716 FAM157CP0CG43 387 aa13.92□□□□□ -0.18
CACNB3-220ENST00000551716 TMED10P49755 219 aaKnown RBP13.92□□□□□ -0.18
CACNB3-220ENST00000551716 IGLV3-21P80748 117 aaPredicted RBP13.92□□□□□ -0.18
CACNB3-220ENST00000551716 PLIN5Q00G26 463 aa13.92□□□□□ -0.18
CACNB3-220ENST00000551716 PCDH1Q08174 1060 aa13.92□□□□□ -0.18
CACNB3-220ENST00000551716 KIF5AQ12840 1032 aa13.92□□□□□ -0.18
CACNB3-220ENST00000551716 CLEC12BQ2HXU8 276 aa13.92□□□□□ -0.18
CACNB3-220ENST00000551716 DCST1Q5T197 706 aa13.92□□□□□ -0.18
CACNB3-220ENST00000551716 TIGD3Q6B0B8 471 aa13.92□□□□□ -0.18
CACNB3-220ENST00000551716 RNF111Q6ZNA4 994 aa13.92□□□□□ -0.18
CACNB3-220ENST00000551716 BTLAQ7Z6A9 289 aa13.92□□□□□ -0.18
CACNB3-220ENST00000551716 SPPL2AQ8TCT8 520 aa13.92□□□□□ -0.18
CACNB3-220ENST00000551716 TP53INP1Q96A56 240 aa13.92□□□□□ -0.18
CACNB3-220ENST00000551716 TMEM41AQ96HV5 264 aa13.92□□□□□ -0.18
CACNB3-220ENST00000551716 SERPINB12Q96P63 405 aa13.92□□□□□ -0.18
CACNB3-220ENST00000551716 FAM111AQ96PZ2 611 aa13.92□□□□□ -0.18
CACNB3-220ENST00000551716 PELOQ9BRX2 385 aaKnown RBP13.92□□□□□ -0.18
CACNB3-220ENST00000551716 TBCDQ9BTW9 1192 aa13.92□□□□□ -0.18
CACNB3-220ENST00000551716 AMBRA1Q9C0C7 1298 aa13.92□□□□□ -0.18
CACNB3-220ENST00000551716 WWTR1Q9GZV5 400 aa13.92□□□□□ -0.18
CACNB3-220ENST00000551716 KIAA1549Q9HCM3 1950 aa13.92□□□□□ -0.18
CACNB3-220ENST00000551716 DSCAMO60469 2012 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 ANK3Q12955 4377 aaKnown RBP13.91□□□□□ -0.18
CACNB3-220ENST00000551716 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 C16orf97H3BN30 126 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 CDC7O00311 574 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 TNFSF13O75888 250 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 NID1P14543 1247 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 IDUAP35475 653 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 UGT2B10P36537 528 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 CDKN2DP55273 166 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 ID2Q02363 134 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 GPS1Q13098 491 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 VEZF1Q14119 521 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 SLBPQ14493 270 aaKnown RBP eCLIP13.91□□□□□ -0.18
CACNB3-220ENST00000551716 FNDC7Q5VTL7 733 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 OR2A2Q6IF42 318 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 SH2D5Q6ZV89 423 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 GCNT2Q8N0V5 402 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 C2CD4AQ8NCU7 369 aaPredicted RBP13.91□□□□□ -0.18
CACNB3-220ENST00000551716 MAIP1Q8WWC4 291 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 TANKQ92844 425 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 CAVIN3Q969G5 261 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 MARK4Q96L34 752 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 SNX15Q9NRS6 342 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 IARS2Q9NSE4 1012 aaKnown RBP13.91□□□□□ -0.18
CACNB3-220ENST00000551716 MS4A12Q9NXJ0 267 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 WWOXQ9NZC7 414 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 PTBP2Q9UKA9 531 aaKnown RBP13.91□□□□□ -0.18
CACNB3-220ENST00000551716 REXO2Q9Y3B8 237 aaKnown RBP13.91□□□□□ -0.18
CACNB3-220ENST00000551716 NINQ8N4C6 2090 aa13.91□□□□□ -0.18
CACNB3-220ENST00000551716 DOCK7Q96N67 2140 aa13.9□□□□□ -0.18
CACNB3-220ENST00000551716 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.9□□□□□ -0.18
CACNB3-220ENST00000551716 A0A1W2PNV4 684 aa13.9□□□□□ -0.18
CACNB3-220ENST00000551716 A8MV72 311 aaPredicted RBP13.9□□□□□ -0.18
CACNB3-220ENST00000551716 SMNDC1O75940 238 aaKnown RBP eCLIP13.9□□□□□ -0.18
CACNB3-220ENST00000551716 CPN2P22792 545 aa13.9□□□□□ -0.18
CACNB3-220ENST00000551716 CASP3P42574 277 aa13.9□□□□□ -0.18
CACNB3-220ENST00000551716 NRG3P56975 720 aa13.9□□□□□ -0.18
CACNB3-220ENST00000551716 CDKL1Q00532 357 aa13.9□□□□□ -0.18
CACNB3-220ENST00000551716 SETDB1Q15047 1291 aa13.9□□□□□ -0.18
CACNB3-220ENST00000551716 SBSNQ6UWP8 590 aa13.9□□□□□ -0.18
CACNB3-220ENST00000551716 YRDCQ86U90 279 aaKnown RBP13.9□□□□□ -0.18
CACNB3-220ENST00000551716 ST13P4Q8IZP2 240 aaPredicted RBP13.9□□□□□ -0.18
CACNB3-220ENST00000551716 ACOT4Q8N9L9 421 aa13.9□□□□□ -0.18
CACNB3-220ENST00000551716 BBOF1Q8ND07 529 aa13.9□□□□□ -0.18
CACNB3-220ENST00000551716 MCUQ8NE86 351 aa13.9□□□□□ -0.18
CACNB3-220ENST00000551716 FAM83FQ8NEG4 500 aaPredicted RBP13.9□□□□□ -0.18
CACNB3-220ENST00000551716 OR1J4Q8NGS1 313 aa13.9□□□□□ -0.18
CACNB3-220ENST00000551716 PPWD1Q96BP3 646 aaKnown RBP13.9□□□□□ -0.18
CACNB3-220ENST00000551716 DTNBP1Q96EV8 351 aa13.9□□□□□ -0.18
CACNB3-220ENST00000551716 TRMT61AQ96FX7 289 aaKnown RBP13.9□□□□□ -0.18
CACNB3-220ENST00000551716 HS3ST6Q96QI5 342 aa13.9□□□□□ -0.18
CACNB3-220ENST00000551716 KRT12Q99456 494 aa13.9□□□□□ -0.18
CACNB3-220ENST00000551716 MAPKAP1Q9BPZ7 522 aa13.9□□□□□ -0.18
CACNB3-220ENST00000551716 EHD1Q9H4M9 534 aa13.9□□□□□ -0.18
CACNB3-220ENST00000551716 TEX10Q9NXF1 929 aaPredicted RBP13.9□□□□□ -0.18
CACNB3-220ENST00000551716 PSD3Q9NYI0 1048 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms