RNA–Protein interactions for RNA: ENST00000550857.5

PTPRB-209, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRB, Length 5,839 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-209ENST00000550857 FGF11Q92914 225 aa7.68□□□□□ -1.18
PTPRB-209ENST00000550857 TRMT61AQ96FX7 289 aaKnown RBP7.68□□□□□ -1.18
PTPRB-209ENST00000550857 COMMD9Q9P000 198 aa7.68□□□□□ -1.18
PTPRB-209ENST00000550857 PCDHB14Q9Y5E9 798 aa7.68□□□□□ -1.18
PTPRB-209ENST00000550857 TMEM8BA6NDV4 472 aa7.68□□□□□ -1.18
PTPRB-209ENST00000550857 LRRC30A6NM36 301 aa7.68□□□□□ -1.18
PTPRB-209ENST00000550857 OR6C76A6NM76 312 aa7.68□□□□□ -1.18
PTPRB-209ENST00000550857 EPHB6O15197 1021 aa7.68□□□□□ -1.18
PTPRB-209ENST00000550857 HOXD4P09016 255 aaPredicted RBP7.68□□□□□ -1.18
PTPRB-209ENST00000550857 CD48P09326 243 aa7.68□□□□□ -1.18
PTPRB-209ENST00000550857 HSMCR30P0CW71 290 aa7.68□□□□□ -1.18
PTPRB-209ENST00000550857 EPHA8P29322 1005 aaPredicted RBP7.68□□□□□ -1.18
PTPRB-209ENST00000550857 MAP3K8P41279 467 aa7.68□□□□□ -1.18
PTPRB-209ENST00000550857 MOGSQ13724 837 aa7.68□□□□□ -1.18
PTPRB-209ENST00000550857 ABRAXAS2Q15018 415 aa7.68□□□□□ -1.18
PTPRB-209ENST00000550857 TNFAIP8L2Q6P589 184 aaPredicted RBP7.68□□□□□ -1.18
PTPRB-209ENST00000550857 PAPD4Q6PIY7 484 aaKnown RBP7.68□□□□□ -1.18
PTPRB-209ENST00000550857 TMEM184AQ6ZMB5 413 aa7.68□□□□□ -1.18
PTPRB-209ENST00000550857 GPRIN1Q7Z2K8 1008 aa7.68□□□□□ -1.18
PTPRB-209ENST00000550857 OR13H1Q8NG92 308 aa7.68□□□□□ -1.18
PTPRB-209ENST00000550857 OR2A12Q8NGT7 310 aa7.68□□□□□ -1.18
PTPRB-209ENST00000550857 ERVMER34-1Q9H9K5 563 aa7.68□□□□□ -1.18
PTPRB-209ENST00000550857 KCNIP1Q9NZI2 227 aa7.68□□□□□ -1.18
PTPRB-209ENST00000550857 PDP2Q9P2J9 529 aa7.68□□□□□ -1.18
PTPRB-209ENST00000550857 TFR2Q9UP52 801 aa7.68□□□□□ -1.18
PTPRB-209ENST00000550857 AP4B1Q9Y6B7 739 aa7.68□□□□□ -1.18
PTPRB-209ENST00000550857 A0A087WXM4 84 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 TEX46H3BTG2 121 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 RNF225M0QZC1 329 aaPredicted RBP7.67□□□□□ -1.18
PTPRB-209ENST00000550857 ADAM12O43184 909 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 PLRG1O43660 514 aaKnown RBP7.67□□□□□ -1.18
PTPRB-209ENST00000550857 ZNF432O94892 652 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 ATE1O95260 518 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 AIMP2Q13155 320 aaKnown RBP7.67□□□□□ -1.18
PTPRB-209ENST00000550857 PDZK1Q5T2W1 519 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 AFMIDQ63HM1 303 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 MZT2BQ6NZ67 158 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 TIFABQ6ZNK6 161 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 VWA5B2Q8N398 1253 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 AMER2Q8N7J2 671 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 ZNF283Q8N7M2 679 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 CNEP1R1Q8N9A8 125 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 SGTBQ96EQ0 304 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 SLC46A1Q96NT5 459 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 C1QTNF2Q9BXJ5 285 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 EBPLQ9BY08 206 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 POLDIP3Q9BY77 421 aaKnown RBP7.67□□□□□ -1.18
PTPRB-209ENST00000550857 OR51B5Q9H339 312 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 DSN1Q9H410 356 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 MTHFD2LQ9H903 347 aaPredicted RBP7.67□□□□□ -1.18
PTPRB-209ENST00000550857 CENPMQ9NSP4 180 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 ZNF226Q9NYT6 803 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 A0A0G2JN53 185 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 FAM92AA1XBS5 289 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 TTC24A2A3L6 582 aaPredicted RBP7.67□□□□□ -1.18
PTPRB-209ENST00000550857 METTL21EPA6NDL7 271 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 LOC730098B7Z3J9 87 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 C21orf140B9A014 251 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 SLC43A1O75387 559 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 OR5F1O95221 314 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 CYC1P08574 325 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 PSMB9P28065 219 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 ATP4BP51164 291 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 ADAM17P78536 824 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 FRMD7Q6ZUT3 714 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 OSTF1Q92882 214 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 MPP4Q96JB8 637 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 FAM84AQ96KN4 292 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 MRGPRX1Q96LB2 322 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 STRA6Q9BX79 667 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 KATNBL1Q9H079 304 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 DUSP15Q9H1R2 295 aaPredicted RBP7.67□□□□□ -1.18
PTPRB-209ENST00000550857 EHD1Q9H4M9 534 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 ZBTB20Q9HC78 741 aaPredicted RBP7.67□□□□□ -1.18
PTPRB-209ENST00000550857 LGALS13Q9UHV8 139 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 ZNF229Q9UJW7 825 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 ZNF346Q9UL40 294 aaKnown RBP7.67□□□□□ -1.18
PTPRB-209ENST00000550857 A0A0G2JPF8 293 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 GGT3PA6NGU5 568 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 HNRNPCL3B7ZW38 293 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 JUNP05412 331 aaKnown RBP7.67□□□□□ -1.18
PTPRB-209ENST00000550857 HNRNPCL4P0DMR1 293 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 FMO3P31513 532 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 CTSKP43235 329 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 TAS2R38P59533 333 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 TAP2Q03519 686 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 PRDX1Q06830 199 aaKnown RBP7.67□□□□□ -1.18
PTPRB-209ENST00000550857 HYAL2Q12891 473 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 GLYATQ6IB77 296 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 SHFQ7M4L6 423 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 METTL27Q8N6F8 245 aaPredicted RBP7.67□□□□□ -1.18
PTPRB-209ENST00000550857 OR8S1Q8NH09 359 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 PYCR2Q96C36 320 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 MRGPRX2Q96LB1 330 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 HDHD2Q9H0R4 259 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 PIF1Q9H611 641 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 SLC6A5Q9Y345 797 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 TIMM22Q9Y584 194 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 LAMB1P07942 1786 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 FAM159BA6NKW6 160 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms