RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 PDCD2Q16342 344 aaPredicted RBP12.79□□□□□ -0.36
TROAP-213ENST00000550709 RFTN2Q52LD8 501 aaPredicted RBP12.79□□□□□ -0.36
TROAP-213ENST00000550709 HSDL2Q6YN16 418 aa12.79□□□□□ -0.36
TROAP-213ENST00000550709 Q6ZS92 163 aa12.79□□□□□ -0.36
TROAP-213ENST00000550709 C7orf57Q8NEG2 295 aa12.79□□□□□ -0.36
TROAP-213ENST00000550709 OR1N1Q8NGS0 311 aa12.79□□□□□ -0.36
TROAP-213ENST00000550709 EXOSC8Q96B26 276 aaKnown RBP12.79□□□□□ -0.36
TROAP-213ENST00000550709 C3orf30Q96M34 536 aa12.79□□□□□ -0.36
TROAP-213ENST00000550709 SORT1Q99523 831 aa12.79□□□□□ -0.36
TROAP-213ENST00000550709 PELOQ9BRX2 385 aaKnown RBP12.79□□□□□ -0.36
TROAP-213ENST00000550709 SIRT5Q9NXA8 310 aa12.79□□□□□ -0.36
TROAP-213ENST00000550709 ABI3Q9P2A4 366 aa12.79□□□□□ -0.36
TROAP-213ENST00000550709 COPS7AQ9UBW8 275 aa12.79□□□□□ -0.36
TROAP-213ENST00000550709 UTS2RQ9UKP6 389 aa12.79□□□□□ -0.36
TROAP-213ENST00000550709 PPIEQ9UNP9 301 aaKnown RBP12.79□□□□□ -0.36
TROAP-213ENST00000550709 ERVK-19Q9WJR5 959 aa12.79□□□□□ -0.36
TROAP-213ENST00000550709 RAP2CQ9Y3L5 183 aa12.79□□□□□ -0.36
TROAP-213ENST00000550709 ZNF780BQ9Y6R6 833 aa12.79□□□□□ -0.36
TROAP-213ENST00000550709 BSNQ9UPA5 3926 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 UQCRHLA0A096LP55 91 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 OR5H15A6NDH6 313 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 WWP2O00308 870 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 LSM1O15116 133 aaKnown RBP12.78□□□□□ -0.36
TROAP-213ENST00000550709 AKAP10O43572 662 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 JUNP05412 331 aaKnown RBP12.78□□□□□ -0.36
TROAP-213ENST00000550709 DRD2P14416 443 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 PORP16435 677 aaPredicted RBP12.78□□□□□ -0.36
TROAP-213ENST00000550709 CSNK2A2P19784 350 aaPredicted RBP12.78□□□□□ -0.36
TROAP-213ENST00000550709 TACR1P25103 407 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 CD96P40200 585 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 MLF1P58340 268 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 TLE1Q04724 770 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 DUSP2Q05923 314 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 TUBA3CQ13748 450 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 ZNF169Q14929 603 aaPredicted RBP12.78□□□□□ -0.36
TROAP-213ENST00000550709 HEPACAMQ14CZ8 416 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 KIAA0040Q15053 153 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 TLR1Q15399 786 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 PRR30Q53SZ7 412 aaPredicted RBP12.78□□□□□ -0.36
TROAP-213ENST00000550709 ZNF468Q5VIY5 522 aaPredicted RBP12.78□□□□□ -0.36
TROAP-213ENST00000550709 TUBA3EQ6PEY2 450 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 Q8NA96 180 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 ADCY4Q8NFM4 1077 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 CLHC1Q8NHS4 586 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 FAM76AQ8TAV0 307 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 ZNF721Q8TF20 911 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 HAS2Q92819 552 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 GFM2Q969S9 779 aaKnown RBP12.78□□□□□ -0.36
TROAP-213ENST00000550709 FBXL20Q96IG2 436 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 EGLN2Q96KS0 407 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 SH3GL2Q99962 352 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 UTP23Q9BRU9 249 aaKnown RBP12.78□□□□□ -0.36
TROAP-213ENST00000550709 CXorf21Q9HAI6 301 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 PNPOQ9NVS9 261 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 BAIAP2L1Q9UHR4 511 aa12.78□□□□□ -0.36
TROAP-213ENST00000550709 SORBS2O94875 1100 aaKnown RBP12.77□□□□□ -0.37
TROAP-213ENST00000550709 LRATO95237 230 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 CT62P0C5K7 136 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 PRPH2P23942 346 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 SSTR4P31391 388 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 TNFSF10P50591 281 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 RPL14P50914 215 aaKnown RBP12.77□□□□□ -0.37
TROAP-213ENST00000550709 RNF4P78317 190 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 LTB4RQ15722 352 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 ATP6AP1LQ52LC2 224 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 XKR7Q5GH72 579 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 C6orf163Q5TEZ5 329 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 ATG16L1Q676U5 607 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 FAM71E1Q6IPT2 247 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 FAM111BQ6SJ93 734 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 RNF165Q6ZSG1 346 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 TICAM1Q8IUC6 712 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 GALNT12Q8IXK2 581 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 CCDC116Q8IYX3 515 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 LRRC25Q8N386 305 aaPredicted RBP12.77□□□□□ -0.37
TROAP-213ENST00000550709 CISD2Q8N5K1 135 aaKnown RBP12.77□□□□□ -0.37
TROAP-213ENST00000550709 TUBGCP3Q96CW5 907 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 C19orf60Q96EN9 201 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 CNRIP1Q96F85 164 aaPredicted RBP12.77□□□□□ -0.37
TROAP-213ENST00000550709 PPP3R2Q96LZ3 170 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 TSSK3Q96PN8 268 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 GAL3ST4Q96RP7 486 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 C1orf50Q9BV19 199 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 BRINP2Q9C0B6 783 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 MANSC1Q9H8J5 431 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 MYNNQ9NPC7 610 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 MIEF1Q9NQG6 463 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 GIMAP4Q9NUV9 329 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 ZNF446Q9NWS9 450 aa12.77□□□□□ -0.37
TROAP-213ENST00000550709 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.77□□□□□ -0.37
TROAP-213ENST00000550709 TNRC6AQ8NDV7 1962 aaKnown RBP12.77□□□□□ -0.37
TROAP-213ENST00000550709 TRAV17A0A0B4J275 112 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 TMEM200CA6NKL6 621 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 HMGB1P1B2RPK0 211 aaPredicted RBP12.76□□□□□ -0.37
TROAP-213ENST00000550709 NPIPB8E9PQR5 432 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 FCHO1O14526 889 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 ITGA10O75578 1167 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 OR2J2O76002 312 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 IGKV3-11P04433 115 aa12.76□□□□□ -0.37
TROAP-213ENST00000550709 KITP10721 976 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms