RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 C6orf120Q7Z4R8 191 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 RNF130Q86XS8 419 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 ZNF595Q8IYB9 648 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 GPR135Q8IZ08 494 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 MMP21Q8N119 569 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 CA13Q8N1Q1 262 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 ICA1LQ8NDH6 482 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 NRG4Q8WWG1 115 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 LZICQ8WZA0 190 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 CCDC74AQ96AQ1 378 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 EME1Q96AY2 570 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 CNRIP1Q96F85 164 aaPredicted RBP11.85□□□□□ -0.51
CACNB3-217ENST00000550483 SLC47A1Q96FL8 570 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 PYURFQ96I23 114 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 SLC35G5Q96KT7 338 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 C10orf90Q96M02 699 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 ZNF681Q96N22 645 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 BTBD9Q96Q07 612 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 PKP2Q99959 881 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 C9orf16Q9BUW7 83 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 OSBPL10Q9BXB5 764 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 TRIM4Q9C037 500 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 Q9H521 79 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 CAAP1Q9H8G2 361 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 SIRT3Q9NTG7 399 aaPredicted RBP11.85□□□□□ -0.51
CACNB3-217ENST00000550483 ZCCHC3Q9NUD5 404 aaKnown RBP11.85□□□□□ -0.51
CACNB3-217ENST00000550483 IRAK4Q9NWZ3 460 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 NTMQ9P121 344 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 PTGFRNQ9P2B2 879 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 GMPR2Q9P2T1 348 aaKnown RBP11.85□□□□□ -0.51
CACNB3-217ENST00000550483 NCDNQ9UBB6 729 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 P2RX2Q9UBL9 471 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 RAB23Q9ULC3 237 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 CLCA2Q9UQC9 943 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 DTNAQ9Y4J8 743 aa11.85□□□□□ -0.51
CACNB3-217ENST00000550483 SETXQ7Z333 2677 aaKnown RBP11.85□□□□□ -0.51
CACNB3-217ENST00000550483 A0A087WV62 115 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 IGHV5-51A0A0C4DH38 117 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 DUXAA6NLW8 204 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 C5orf58C9J3I9 102 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 CLDN4O14493 209 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 PGRMC2O15173 223 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 GPR75O95800 540 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 SERPINA1P01009 418 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 ATP1B1P05026 303 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 CKMT1AP12532 417 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 CPMP14384 443 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 PORP16435 677 aaPredicted RBP11.84□□□□□ -0.51
CACNB3-217ENST00000550483 NELFEP18615 380 aaKnown RBP11.84□□□□□ -0.51
CACNB3-217ENST00000550483 ACY1Q03154 408 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 SLC14A1Q13336 389 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 SCARB2Q14108 478 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 GK3PQ14409 553 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 PRSS53Q2L4Q9 553 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 GRAMD1BQ3KR37 738 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.84□□□□□ -0.51
CACNB3-217ENST00000550483 REEP3Q6NUK4 255 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 ZCCHC12Q6PEW1 402 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 CEACAM20Q6UY09 585 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 RNF111Q6ZNA4 994 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 BPHLQ86WA6 291 aaPredicted RBP11.84□□□□□ -0.51
CACNB3-217ENST00000550483 OR4D9Q8NGE8 314 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 SUN3Q8TAQ9 357 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 PNPT1Q8TCS8 783 aaKnown RBP11.84□□□□□ -0.51
CACNB3-217ENST00000550483 ZNF675Q8TD23 568 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 NETO1Q8TDF5 533 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 TBC1D20Q96BZ9 403 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 TACO1Q9BSH4 297 aaKnown RBP11.84□□□□□ -0.51
CACNB3-217ENST00000550483 SPATA5L1Q9BVQ7 753 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 CHID1Q9BWS9 393 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 CALML5Q9NZT1 146 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 PDP2Q9P2J9 529 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 SERTAD3Q9UJW9 196 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 BAG5Q9UL15 447 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 SRPK3Q9UPE1 567 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 LIPT1Q9Y234 373 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 SDK1Q7Z5N4 2213 aa11.84□□□□□ -0.51
CACNB3-217ENST00000550483 DSPP15924 2871 aaKnown RBP11.83□□□□□ -0.52
CACNB3-217ENST00000550483 TMEM131Q92545 1883 aa11.83□□□□□ -0.52
CACNB3-217ENST00000550483 CYR61O00622 381 aa11.83□□□□□ -0.52
CACNB3-217ENST00000550483 KHNYNO15037 678 aaKnown RBP11.83□□□□□ -0.52
CACNB3-217ENST00000550483 SUV39H1O43463 412 aa11.83□□□□□ -0.52
CACNB3-217ENST00000550483 SIGLEC6O43699 453 aa11.83□□□□□ -0.52
CACNB3-217ENST00000550483 DPM1O60762 260 aa11.83□□□□□ -0.52
CACNB3-217ENST00000550483 OR2B3O76000 313 aa11.83□□□□□ -0.52
CACNB3-217ENST00000550483 ETFAP13804 333 aa11.83□□□□□ -0.52
CACNB3-217ENST00000550483 EFNA1P20827 205 aaPredicted RBP11.83□□□□□ -0.52
CACNB3-217ENST00000550483 ATP6V1C1P21283 382 aa11.83□□□□□ -0.52
CACNB3-217ENST00000550483 TGM1P22735 817 aa11.83□□□□□ -0.52
CACNB3-217ENST00000550483 PEX2P28328 305 aa11.83□□□□□ -0.52
CACNB3-217ENST00000550483 GALNSP34059 522 aa11.83□□□□□ -0.52
CACNB3-217ENST00000550483 MAGEA2P43356 314 aa11.83□□□□□ -0.52
CACNB3-217ENST00000550483 CDK9P50750 372 aaKnown RBP11.83□□□□□ -0.52
CACNB3-217ENST00000550483 XKP51811 444 aa11.83□□□□□ -0.52
CACNB3-217ENST00000550483 ITGA1P56199 1179 aa11.83□□□□□ -0.52
CACNB3-217ENST00000550483 TRA2AQ13595 282 aaKnown RBP eCLIP11.83□□□□□ -0.52
CACNB3-217ENST00000550483 MYBPC3Q14896 1274 aa11.83□□□□□ -0.52
CACNB3-217ENST00000550483 TAF11Q15544 211 aa11.83□□□□□ -0.52
CACNB3-217ENST00000550483 AMZ1Q400G9 498 aa11.83□□□□□ -0.52
CACNB3-217ENST00000550483 LRRC23Q53EV4 343 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms