RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 FAM111BQ6SJ93 734 aa9.06□□□□□ -0.96
HDAC7-229ENST00000549883 LYPD8Q6UX82 237 aa9.06□□□□□ -0.96
HDAC7-229ENST00000549883 FRMD7Q6ZUT3 714 aa9.06□□□□□ -0.96
HDAC7-229ENST00000549883 FGD2Q7Z6J4 655 aa9.06□□□□□ -0.96
HDAC7-229ENST00000549883 TRABD2AQ86V40 505 aa9.06□□□□□ -0.96
HDAC7-229ENST00000549883 CHERPQ8IWX8 916 aaKnown RBP9.06□□□□□ -0.96
HDAC7-229ENST00000549883 ST13P4Q8IZP2 240 aaPredicted RBP9.06□□□□□ -0.96
HDAC7-229ENST00000549883 BANPQ8N9N5 519 aa9.06□□□□□ -0.96
HDAC7-229ENST00000549883 DNAJB8Q8NHS0 232 aa9.06□□□□□ -0.96
HDAC7-229ENST00000549883 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.06□□□□□ -0.96
HDAC7-229ENST00000549883 RIT1Q92963 219 aa9.06□□□□□ -0.96
HDAC7-229ENST00000549883 RBM18Q96H35 190 aaKnown RBP9.06□□□□□ -0.96
HDAC7-229ENST00000549883 FBXL20Q96IG2 436 aa9.06□□□□□ -0.96
HDAC7-229ENST00000549883 MECRQ9BV79 373 aa9.06□□□□□ -0.96
HDAC7-229ENST00000549883 EBPLQ9BY08 206 aa9.06□□□□□ -0.96
HDAC7-229ENST00000549883 ANKRA2Q9H9E1 313 aa9.06□□□□□ -0.96
HDAC7-229ENST00000549883 CXorf21Q9HAI6 301 aa9.06□□□□□ -0.96
HDAC7-229ENST00000549883 BRF2Q9HAW0 419 aa9.06□□□□□ -0.96
HDAC7-229ENST00000549883 OXSMQ9NWU1 459 aa9.06□□□□□ -0.96
HDAC7-229ENST00000549883 SEC14L3Q9UDX4 400 aa9.06□□□□□ -0.96
HDAC7-229ENST00000549883 SH3BGRL2Q9UJC5 107 aa9.06□□□□□ -0.96
HDAC7-229ENST00000549883 ADAM29Q9UKF5 820 aa9.06□□□□□ -0.96
HDAC7-229ENST00000549883 GRID1Q9ULK0 1009 aa9.06□□□□□ -0.96
HDAC7-229ENST00000549883 NPIPA1Q9UND3 350 aa9.06□□□□□ -0.96
HDAC7-229ENST00000549883 SLC5A6Q9Y289 635 aa9.06□□□□□ -0.96
HDAC7-229ENST00000549883 YARS2Q9Y2Z4 477 aaKnown RBP9.06□□□□□ -0.96
HDAC7-229ENST00000549883 PCDHA9Q9Y5H5 950 aa9.06□□□□□ -0.96
HDAC7-229ENST00000549883 PEX1O43933 1283 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 ULK1O75385 1050 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 LRATO95237 230 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 MLYCDO95822 493 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 CLDN1O95832 211 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 KRT6AP02538 564 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 KRT6BP04259 564 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 SLC35E2P0CK97 266 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 CCL3P10147 92 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 CPMP14384 443 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 S1PR1P21453 382 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 PIK3R1P27986 724 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 ALDH3A1P30838 453 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 ARRB2P32121 409 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 FEN1P39748 380 aaKnown RBP9.05□□□□□ -0.96
HDAC7-229ENST00000549883 CCT5P48643 541 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 KRT6CP48668 564 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 ALDH9A1P49189 494 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 XKP51811 444 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 PKNOX1P55347 436 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 SLC37A1P57057 533 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 ALDH6A1Q02252 535 aaKnown RBP9.05□□□□□ -0.96
HDAC7-229ENST00000549883 MGAT2Q10469 447 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 LTB4RQ15722 352 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 C4orf17Q53FE4 359 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 CLEC6AQ6EIG7 209 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 OR52E8Q6IFG1 317 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 NCCRP1Q6ZVX7 275 aaPredicted RBP9.05□□□□□ -0.96
HDAC7-229ENST00000549883 FJX1Q86VR8 437 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 SRRM1Q8IYB3 904 aaKnown RBP9.05□□□□□ -0.96
HDAC7-229ENST00000549883 CCDC63Q8NA47 563 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 TMEM178AQ8NBL3 297 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 PSD4Q8NDX1 1056 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 ADCY4Q8NFM4 1077 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 OR4K14Q8NGD5 310 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 ASB15Q8WXK1 588 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 CAVIN3Q969G5 261 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 C11orf24Q96F05 449 aaPredicted RBP9.05□□□□□ -0.96
HDAC7-229ENST00000549883 CNRIP1Q96F85 164 aaPredicted RBP9.05□□□□□ -0.96
HDAC7-229ENST00000549883 GPR137Q96N19 417 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 GAL3ST4Q96RP7 486 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 GATA5Q9BWX5 397 aaPredicted RBP9.05□□□□□ -0.96
HDAC7-229ENST00000549883 AHSPQ9NZD4 102 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 VPS29Q9UBQ0 182 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 LGALS13Q9UHV8 139 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 ERVK-11Q9UQG0 969 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 DTX4Q9Y2E6 619 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 PLLPQ9Y342 182 aa9.05□□□□□ -0.96
HDAC7-229ENST00000549883 NCOA6Q14686 2063 aaPredicted RBP9.04□□□□□ -0.96
HDAC7-229ENST00000549883 A8MVJ9 347 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 TMEM233B4DJY2 109 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 ZG16O60844 167 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 ERAL1O75616 437 aaKnown RBP9.04□□□□□ -0.96
HDAC7-229ENST00000549883 ENO1P06733 434 aaKnown RBP9.04□□□□□ -0.96
HDAC7-229ENST00000549883 CHRNGP07510 517 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 IL3P08700 152 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 STSP08842 583 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 COX7A2P14406 83 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 NT5EP21589 574 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 DNASE1L1P49184 302 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 DNAJB13P59910 316 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 CSTF3Q12996 717 aaKnown RBP9.04□□□□□ -0.96
HDAC7-229ENST00000549883 EXOSC7Q15024 291 aaKnown RBP9.04□□□□□ -0.96
HDAC7-229ENST00000549883 EBPQ15125 230 aaKnown RBP9.04□□□□□ -0.96
HDAC7-229ENST00000549883 C3AR1Q16581 482 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 SPRED3Q2MJR0 410 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 ZNF791Q3KP31 576 aaPredicted RBP9.04□□□□□ -0.96
HDAC7-229ENST00000549883 CCDC153Q494R4 210 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 PIGGQ5H8A4 983 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 C10orf62Q5T681 223 aaPredicted RBP9.04□□□□□ -0.96
HDAC7-229ENST00000549883 CES4AQ5XG92 561 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 DESI1Q6ICB0 168 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 SLC48A1Q6P1K1 146 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms