RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 PAQR8Q8TEZ7 354 aa16.04■□□□□ 0.16
CHMP1A-205ENST00000548650 GAL3ST4Q96RP7 486 aa16.04■□□□□ 0.16
CHMP1A-205ENST00000548650 PELOQ9BRX2 385 aaKnown RBP16.04■□□□□ 0.16
CHMP1A-205ENST00000548650 UCK2Q9BZX2 261 aa16.04■□□□□ 0.16
CHMP1A-205ENST00000548650 WWTR1Q9GZV5 400 aa16.04■□□□□ 0.16
CHMP1A-205ENST00000548650 DDX31Q9H8H2 851 aaKnown RBP16.04■□□□□ 0.16
CHMP1A-205ENST00000548650 IPPKQ9H8X2 491 aa16.04■□□□□ 0.16
CHMP1A-205ENST00000548650 MCCC2Q9HCC0 563 aa16.04■□□□□ 0.16
CHMP1A-205ENST00000548650 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.04■□□□□ 0.16
CHMP1A-205ENST00000548650 TNFRSF10DQ9UBN6 386 aa16.04■□□□□ 0.16
CHMP1A-205ENST00000548650 RNF11Q9Y3C5 154 aa16.04■□□□□ 0.16
CHMP1A-205ENST00000548650 CHCHD2Q9Y6H1 151 aaPredicted RBP16.04■□□□□ 0.16
CHMP1A-205ENST00000548650 HIVEP1P15822 2718 aa16.04■□□□□ 0.16
CHMP1A-205ENST00000548650 FREM3P0C091 2139 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 NINQ8N4C6 2090 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 ATP6AP2A0A1C7CYW4 349 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 GLOD5A6NK44 160 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 WASHC1A8K0Z3 465 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 ATP6AP2O75787 350 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 GPR75O95800 540 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 FBXO45P0C2W1 286 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 FAM58BPP0C7Q3 252 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 TYK2P29597 1187 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 MAGEA12P43365 314 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 NEK2P51955 445 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 SLC37A1P57057 533 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 PMPCAQ10713 525 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 PRAMEF20Q5VT98 475 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 RTL6Q6ICC9 239 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 METTL2BQ6P1Q9 378 aaKnown RBP16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 KLC3Q6P597 504 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 RNF111Q6ZNA4 994 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 PLD6Q8N2A8 252 aaKnown RBP16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 FBXW8Q8N3Y1 598 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 SLC15A4Q8N697 577 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 OR10G3Q8NGC4 313 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 OR52B6Q8NGF0 335 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 ISL2Q96A47 359 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 PROK2Q9HC23 129 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 TEX10Q9NXF1 929 aaPredicted RBP16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 SPRR3Q9UBC9 169 aa16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 TNPO3Q9Y5L0 923 aaKnown RBP16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.03■□□□□ 0.16
CHMP1A-205ENST00000548650 SPG11Q96JI7 2443 aa16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 A0A1W2PS29 197 aa16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 FOXE1O00358 373 aaPredicted RBP16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 OR7A17O14581 309 aa16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 SUSD5O60279 629 aa16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 OR10H2O60403 315 aa16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 SEMA3DO95025 777 aa16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 PHBP35232 272 aa16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 MAN2A2P49641 1150 aa16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 CKAP4Q07065 602 aaKnown RBP16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 TRAF3Q13114 568 aa16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 ZNF267Q14586 743 aaPredicted RBP16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 OR52E8Q6IFG1 317 aa16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 ZNF585AQ6P3V2 769 aa16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 CYP20A1Q6UW02 462 aa16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 B3GNT6Q6ZMB0 384 aa16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 SLC29A4Q7RTT9 530 aa16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 CDH24Q86UP0 819 aa16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 DND1Q8IYX4 353 aaKnown RBP16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 LRRC25Q8N386 305 aaPredicted RBP16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 PTGR2Q8N8N7 351 aaPredicted RBP16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 ZNF441Q8N8Z8 693 aa16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 UCN3Q969E3 161 aa16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 CDK15Q96Q40 435 aa16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 TTYH2Q9BSA4 534 aa16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 LRRC1Q9BTT6 524 aa16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 FUT8Q9BYC5 575 aa16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 VPS11Q9H270 941 aa16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 PSD3Q9NYI0 1048 aa16.02■□□□□ 0.16
CHMP1A-205ENST00000548650 OR6C76A6NM76 312 aa16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 HCN1O60741 890 aa16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 CLDN9O95484 217 aa16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 GBAP04062 536 aa16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 RFPL3SP0C7P2 107 aa16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 GLI4P10075 376 aa16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 CAPN3P20807 821 aa16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 GALNSP34059 522 aa16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 KCNJ2P63252 427 aa16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 SLC22A10Q63ZE4 541 aa16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 RELL1Q8IUW5 271 aa16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 FAM13CQ8NE31 585 aa16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 SLC44A1Q8WWI5 657 aa16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 RIT1Q92963 219 aa16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 CDC42EP4Q9H3Q1 356 aaKnown RBP16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 NOL11Q9H8H0 719 aaKnown RBP16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 WDR41Q9HAD4 459 aa16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 ZFP64Q9NPA5 681 aa16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 KCNJ16Q9NPI9 418 aa16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 ZNF358Q9NW07 568 aa16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 XPR1Q9UBH6 696 aa16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 PCTPQ9UKL6 214 aa16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 CNOT11Q9UKZ1 510 aaKnown RBP16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 BOKQ9UMX3 212 aaPredicted RBP16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 ANKHD1Q8IWZ3 2542 aaKnown RBP16.01■□□□□ 0.15
CHMP1A-205ENST00000548650 C2CD3Q4AC94 2353 aa16■□□□□ 0.15
CHMP1A-205ENST00000548650 A0A0G2JNJ9 132 aa16■□□□□ 0.15
CHMP1A-205ENST00000548650 IQANK1A0A1B0GTG1 560 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms