RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 TNFRSF10DQ9UBN6 386 aa6.2□□□□□ -1.42
SCAF11-211ENST00000547950 MTRF1LQ9UGC7 380 aaKnown RBP6.2□□□□□ -1.42
SCAF11-211ENST00000547950 PHF11Q9UIL8 331 aa6.2□□□□□ -1.42
SCAF11-211ENST00000547950 ASB4Q9Y574 426 aa6.2□□□□□ -1.42
SCAF11-211ENST00000547950 TNPO3Q9Y5L0 923 aaKnown RBP6.2□□□□□ -1.42
SCAF11-211ENST00000547950 IKBKGQ9Y6K9 419 aa6.2□□□□□ -1.42
SCAF11-211ENST00000547950 MYO9AB2RTY4 2548 aa6.2□□□□□ -1.42
SCAF11-211ENST00000547950 PCM1Q15154 2024 aa6.2□□□□□ -1.42
SCAF11-211ENST00000547950 CROCCQ5TZA2 2017 aa6.2□□□□□ -1.42
SCAF11-211ENST00000547950 SCN3AQ9NY46 2000 aa6.2□□□□□ -1.42
SCAF11-211ENST00000547950 CCDC189A1A4V9 331 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 FOXE1O00358 373 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-211ENST00000547950 OR7A17O14581 309 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 PGRMC2O15173 223 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 OIP5O43482 229 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 KLK8O60259 260 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 UGDHO60701 494 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 GLSO94925 669 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-211ENST00000547950 LRATO95237 230 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 IGKV3-11P04433 115 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 KLK1P06870 262 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 THBS1P07996 1170 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 CELA3AP09093 270 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 RBP1P09455 135 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 CCL3P10147 92 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 MSX1P28360 303 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 PTGER4P35408 488 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 BSGP35613 385 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 MAGEA5P43359 124 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 CCNG1P51959 295 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 HERVK_113P63132 956 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 ERVK-8P63133 956 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 KCNJ2P63252 427 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 IGLV3-21P80748 117 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-211ENST00000547950 PLIN5Q00G26 463 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 TNFRSF17Q02223 184 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 CUL3Q13618 768 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 SLC10A1Q14973 349 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 WHAMMP3Q1A5X7 153 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 MPEG1Q2M385 716 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 ZNF791Q3KP31 576 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-211ENST00000547950 TECRLQ5HYJ1 363 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 TEX35Q5T0J7 233 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 NDUFAF5Q5TEU4 345 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 PRAMEF20Q5VT98 475 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 TMEM211Q6ICI0 200 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 TMEM64Q6YI46 380 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 MEX3BQ6ZN04 569 aaKnown RBP6.19□□□□□ -1.42
SCAF11-211ENST00000547950 RNF111Q6ZNA4 994 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 RGS9BPQ6ZS82 235 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 GK5Q6ZS86 529 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 SLC29A4Q7RTT9 530 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 MILR1Q7Z6M3 343 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 CCDC71Q8IV32 467 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-211ENST00000547950 C9orf40Q8IXQ3 194 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 ST13P4Q8IZP2 240 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-211ENST00000547950 ZNF295-AS1Q8N0V1 137 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 ZCCHC7Q8N3Z6 543 aaKnown RBP6.19□□□□□ -1.42
SCAF11-211ENST00000547950 RPRMLQ8N4K4 120 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 MARVELD2Q8N4S9 558 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 TMEM251Q8N6I4 163 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 L3MBTL4Q8NA19 623 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 GOLM1Q8NBJ4 401 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 NOA1Q8NC60 698 aaKnown RBP6.19□□□□□ -1.42
SCAF11-211ENST00000547950 FAM13CQ8NE31 585 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 C7orf57Q8NEG2 295 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 OR52B6Q8NGF0 335 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 OR10Q1Q8NGQ4 319 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 SLC22A8Q8TCC7 542 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 SLC44A1Q8WWI5 657 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 RND1Q92730 232 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 FBXL20Q96IG2 436 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 ART5Q96L15 291 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 JSRP1Q96MG2 331 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-211ENST00000547950 NSUN5Q96P11 429 aaKnown RBP6.19□□□□□ -1.42
SCAF11-211ENST00000547950 GAL3ST4Q96RP7 486 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 ERVK-6Q9BXR3 956 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 ZNF717Q9BY31 904 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-211ENST00000547950 UCK2Q9BZX2 261 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 TP63Q9H3D4 680 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-211ENST00000547950 CDC42EP4Q9H3Q1 356 aaKnown RBP6.19□□□□□ -1.42
SCAF11-211ENST00000547950 ACSS3Q9H6R3 686 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 LDAHQ9H6V9 325 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 DDX31Q9H8H2 851 aaKnown RBP6.19□□□□□ -1.42
SCAF11-211ENST00000547950 WDR41Q9HAD4 459 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 IL1RL2Q9HB29 575 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 SEMA4BQ9NPR2 832 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-211ENST00000547950 PNPLA3Q9NST1 481 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.19□□□□□ -1.42
SCAF11-211ENST00000547950 TUBA8Q9NY65 449 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-211ENST00000547950 DMGDHQ9UI17 866 aaKnown RBP6.19□□□□□ -1.42
SCAF11-211ENST00000547950 ITGB1BP2Q9UKP3 347 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 ACAD8Q9UKU7 415 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 ERVK-19Q9WJR5 959 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 TSC22D4Q9Y3Q8 395 aa6.19□□□□□ -1.42
SCAF11-211ENST00000547950 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.19□□□□□ -1.42
SCAF11-211ENST00000547950 NBPF19A0A087WUL8 3843 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 HEATR5BQ9P2D3 2071 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 A0A0A6YYD5 115 aa6.18□□□□□ -1.42
SCAF11-211ENST00000547950 NKX2-6A6NCS4 301 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms