RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 DUSP26Q9BV47 211 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 NUSAP1Q9BXS6 441 aaKnown RBP5.23□□□□□ -1.57
LIMA1-203ENST00000547825 HDHD5Q9BXW7 423 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 FAM83DQ9H4H8 585 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 MRPL15Q9P015 296 aaKnown RBP5.23□□□□□ -1.57
LIMA1-203ENST00000547825 TUBD1Q9UJT1 453 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 SPO11Q9Y5K1 396 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 HS3ST4Q9Y661 456 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 KCNE2Q9Y6J6 123 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 A0A1W2PQ09 198 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 MEIOCA2RUB1 952 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 A8MUA0 341 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 TARM1B6A8C7 271 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 STX11O75558 287 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 CATP04040 527 aaKnown RBP5.23□□□□□ -1.57
LIMA1-203ENST00000547825 ALPLP05186 524 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 ZNF806P0C7X5 589 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 CSF2RAP15509 400 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 C5AR1P21730 350 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 SSTR2P30874 369 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 EVI2BP34910 448 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 STC1P52823 247 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 WDR5P61964 334 aaKnown RBP5.23□□□□□ -1.57
LIMA1-203ENST00000547825 HSF2Q03933 536 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 MTAPQ13126 283 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 ZNF181Q2M3W8 571 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 NDUFAF6Q330K2 333 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 CEP68Q76N32 757 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 DNAJB7Q7Z6W7 309 aaPredicted RBP5.23□□□□□ -1.57
LIMA1-203ENST00000547825 MFSD4AQ8N468 514 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 TMEM52Q8NDY8 209 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 TEX47Q8TBZ9 253 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 RAB8BQ92930 207 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 EGLN2Q96KS0 407 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 GINS4Q9BRT9 223 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 CCM2Q9BSQ5 444 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 PDCD10Q9BUL8 212 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 BOCQ9BWV1 1114 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 KLHL31Q9H511 634 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 BRD9Q9H8M2 597 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 TLR9Q9NR96 1032 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 PLSCR3Q9NRY6 295 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 KLHL28Q9NXS3 571 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 LOC105369274A0A096LPK9 316 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 A0A1B0GTL3 188 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 A0A1W2PQL4 384 aaPredicted RBP5.23□□□□□ -1.57
LIMA1-203ENST00000547825 FAM170BA6NMN3 283 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 SCAMP1O15126 338 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 UGT2B17O75795 530 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 APOC3P02656 99 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 RPLP2P05387 115 aaKnown RBP5.23□□□□□ -1.57
LIMA1-203ENST00000547825 BCKDHAP12694 445 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 ATF6P18850 670 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 DRD5P21918 477 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 RPL35P42766 123 aaKnown RBP5.23□□□□□ -1.57
LIMA1-203ENST00000547825 MLLT6P55198 1093 aaPredicted RBP5.23□□□□□ -1.57
LIMA1-203ENST00000547825 PPP2R2BQ00005 443 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 EMX2Q04743 252 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 FOXM1Q08050 763 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 SELENBP1Q13228 472 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 AQP6Q13520 282 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 OXA1LQ15070 435 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 PTPRRQ15256 657 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 CRB2Q5IJ48 1285 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 CATSPEREQ5SY80 951 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 ZNF362Q5T0B9 420 aaPredicted RBP5.23□□□□□ -1.57
LIMA1-203ENST00000547825 ATAD3CQ5T2N8 411 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 PXDC1Q5TGL8 231 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 CNKSR3Q6P9H4 555 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 ARL9Q6T311 187 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 RFPL4BQ6ZWI9 263 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 OTOP2Q7RTS6 562 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 CLECL1Q8IZS7 167 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 OR4N4Q8N0Y3 316 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 ZBTB2Q8N680 514 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 C1orf52Q8N6N3 182 aaKnown RBP5.23□□□□□ -1.57
LIMA1-203ENST00000547825 BEST4Q8NFU0 473 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 COQ8AQ8NI60 647 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 GPR151Q8TDV0 419 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 SLC22A17Q8WUG5 538 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 SLC35B4Q969S0 331 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 ZNF599Q96NL3 588 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 RDH12Q96NR8 316 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 SLC38A2Q96QD8 506 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 PAAF1Q9BRP4 392 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 DIABLOQ9NR28 239 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 MLXQ9UH92 298 aa5.23□□□□□ -1.57
LIMA1-203ENST00000547825 FANCMQ8IYD8 2048 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 TRBC2A0A5B9 178 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 WWP2O00308 870 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 INSIG1O15503 277 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 OR7A10O76100 309 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 ANXA8P13928 327 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 TNFSF8P32971 234 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 AIF1P55008 147 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 ABHD18Q0P651 414 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 PTCHD3Q3KNS1 767 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 CCDC58Q4VC31 144 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 FLYWCH1Q4VC44 716 aa5.22□□□□□ -1.57
LIMA1-203ENST00000547825 GCNT6Q5T4J0 391 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms