RNA–Protein interactions for RNA: ENST00000547148.5

PFKM-208, Transcript of phosphofructokinase, muscle, human

TSL 3

Gene PFKM, Length 775 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-208	ENST00000547148	NTS	P30990	170 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	FOLR3	P41439	243 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	STT3A	P46977	705 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	EMP2	P54851	167 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	GABPB1	Q06547	395 aa	Predicted RBP	11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	STX4	Q12846	297 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	SERTAD2	Q14140	314 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	KRT72	Q14CN4	511 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	MLC1	Q15049	377 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	TLR1	Q15399	786 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	MAPRE2	Q15555	327 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	NSDHL	Q15738	373 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	ANXA8L1	Q5VT79	327 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	TMEM205	Q6UW68	189 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	DGAT2L6	Q6ZPD8	337 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	MSANTD1	Q6ZTZ1	278 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	LANCL3	Q6ZV70	420 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	TRPM8	Q7Z2W7	1104 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	ANKRD46	Q86W74	232 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	PROSER1	Q86XN7	944 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	SAMD14	Q8IZD0	417 aa	Predicted RBP	11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	ST13P4	Q8IZP2	240 aa	Predicted RBP	11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	CLECL1	Q8IZS7	167 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	LRRC25	Q8N386	305 aa	Predicted RBP	11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	NATD1	Q8N6N6	113 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	IL22RA1	Q8N6P7	574 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	OR9A2	Q8NGT5	310 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	SNIP1	Q8TAD8	396 aa	Known RBP	11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	TSPEAR	Q8WU66	669 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	CCDC115	Q96NT0	180 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	OR52E6	Q96RD3	313 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	SLC25A23	Q9BV35	468 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	ALOXE3	Q9BYJ1	711 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	GLIPR2	Q9H4G4	154 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	DKK4	Q9UBT3	224 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	IL17B	Q9UHF5	180 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	ERVK-11	Q9UQG0	969 aa		11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	FARSA	Q9Y285	508 aa	Known RBP	11.16	□□□□□ -0.62
PFKM-208	ENST00000547148	CELSR3	Q9NYQ7	3312 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	LOC102723996	A0A087X1L8	192 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	MYOCOS	A0A1B0GUC4	107 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	PRSS51	A0A1B0GVH4	220 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148		A0A1W2PQ72	361 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	SYNDIG1L	A6NDD5	238 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	FBP2	O00757	339 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	TLX3	O43711	291 aa	Predicted RBP	11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	COX4I1	P13073	169 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	LIF	P15018	202 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	POR	P16435	677 aa	Predicted RBP	11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	PRDX6	P30041	224 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	PTGER1	P34995	402 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	SOX18	P35713	384 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	NCBP2	P52298	156 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	RPS15	P62841	145 aa	Known RBP	11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	PLIN5	Q00G26	463 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	MGAT2	Q10469	447 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	IL10RA	Q13651	578 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	COL28A1	Q2UY09	1125 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	ZNF628	Q5EBL2	1059 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	COQ5	Q5HYK3	327 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	SLC2A7	Q6PXP3	512 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	C6orf89	Q6UWU4	347 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	ZNF551	Q7Z340	670 aa	Predicted RBP	11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	PPP1R32	Q7Z5V6	425 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	ANKRD37	Q7Z713	158 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	VASH2	Q86V25	355 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	RETREG3	Q86VR2	466 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	CCDC116	Q8IYX3	515 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	POU5F2	Q8N7G0	328 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	RP9	Q8TA86	221 aa	Known RBP	11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	PSMA8	Q8TAA3	256 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	OR5P2	Q8WZ92	322 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	FGF11	Q92914	225 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	PPWD1	Q96BP3	646 aa	Known RBP	11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	ZBED6CL	Q96FA7	236 aa	Predicted RBP	11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	BBS4	Q96RK4	519 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	TRIM4	Q9C037	500 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	GPN2	Q9H9Y4	310 aa	Predicted RBP	11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	SEMA3G	Q9NS98	782 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	ARL8B	Q9NVJ2	186 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	BTNL2	Q9UIR0	455 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	KCND3	Q9UK17	655 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	MAN2B2	Q9Y2E5	1009 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	NDUFAF1	Q9Y375	327 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	HS3ST3B1	Q9Y662	390 aa		11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	MRPS18B	Q9Y676	258 aa	Known RBP	11.15	□□□□□ -0.62
PFKM-208	ENST00000547148	SMG1	Q96Q15	3661 aa	Known RBP	11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	LOC100653049	A0A140TA62	436 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148		A0A1W2PRB8	838 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	BBIP1	A8MTZ0	92 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	SOCS6	O14544	535 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	PCDH17	O14917	1159 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	ANGPT2	O15123	496 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	OR10H2	O60403	315 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	KRT34	O76011	436 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	CBX6	O95503	412 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	C6orf47	O95873	294 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	IGHE	P01854	428 aa		11.14	□□□□□ -0.63
PFKM-208	ENST00000547148	CAPNS1	P04632	268 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms