RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 WDR55Q9H6Y2 383 aaPredicted RBP19.1■□□□□ 0.65
HMGA2-211ENST00000545998 MIEF1Q9NQG6 463 aa19.1■□□□□ 0.65
HMGA2-211ENST00000545998 SLC35C2Q9NQQ7 365 aa19.1■□□□□ 0.65
HMGA2-211ENST00000545998 G3BP2Q9UN86 482 aaKnown RBP19.1■□□□□ 0.65
HMGA2-211ENST00000545998 EIF3LQ9Y262 564 aaKnown RBP19.1■□□□□ 0.65
HMGA2-211ENST00000545998 PRRC2CQ9Y520 2896 aaKnown RBP19.1■□□□□ 0.65
HMGA2-211ENST00000545998 CFAP46Q8IYW2 2715 aa19.09■□□□□ 0.65
HMGA2-211ENST00000545998 GOLGA8QA0A0J9YX86 632 aa19.09■□□□□ 0.65
HMGA2-211ENST00000545998 GOLGA8OA6NCC3 632 aa19.09■□□□□ 0.65
HMGA2-211ENST00000545998 TCP11X1B4DZS4 312 aa19.09■□□□□ 0.65
HMGA2-211ENST00000545998 GOLGA8NF8WBI6 632 aa19.09■□□□□ 0.65
HMGA2-211ENST00000545998 ATXN7O15265 892 aaPredicted RBP19.09■□□□□ 0.65
HMGA2-211ENST00000545998 LRATO95237 230 aa19.09■□□□□ 0.65
HMGA2-211ENST00000545998 LBPP18428 481 aa19.09■□□□□ 0.65
HMGA2-211ENST00000545998 CSNK2A2P19784 350 aaPredicted RBP19.09■□□□□ 0.65
HMGA2-211ENST00000545998 DUSP2Q05923 314 aa19.09■□□□□ 0.65
HMGA2-211ENST00000545998 LY6DQ14210 128 aa19.09■□□□□ 0.65
HMGA2-211ENST00000545998 PTGR1Q14914 329 aa19.09■□□□□ 0.65
HMGA2-211ENST00000545998 CEBPEQ15744 281 aa19.09■□□□□ 0.65
HMGA2-211ENST00000545998 SPRED3Q2MJR0 410 aa19.09■□□□□ 0.65
HMGA2-211ENST00000545998 IRAK1BP1Q5VVH5 260 aa19.09■□□□□ 0.65
HMGA2-211ENST00000545998 OGFOD2Q6N063 350 aa19.09■□□□□ 0.65
HMGA2-211ENST00000545998 TCTN3Q6NUS6 607 aa19.09■□□□□ 0.65
HMGA2-211ENST00000545998 H3F3CQ6NXT2 135 aa19.09■□□□□ 0.65
HMGA2-211ENST00000545998 SLC2A12Q8TD20 617 aa19.09■□□□□ 0.65
HMGA2-211ENST00000545998 RIT1Q92963 219 aa19.09■□□□□ 0.65
HMGA2-211ENST00000545998 NCLNQ969V3 563 aa19.09■□□□□ 0.65
HMGA2-211ENST00000545998 ZNF764Q96H86 408 aaPredicted RBP19.09■□□□□ 0.65
HMGA2-211ENST00000545998 SEMA4CQ9C0C4 833 aa19.09■□□□□ 0.65
HMGA2-211ENST00000545998 CXorf21Q9HAI6 301 aa19.09■□□□□ 0.65
HMGA2-211ENST00000545998 ZNF223Q9UK11 482 aaPredicted RBP19.09■□□□□ 0.65
HMGA2-211ENST00000545998 K7EM74 188 aa19.08■□□□□ 0.65
HMGA2-211ENST00000545998 AKAP10O43572 662 aa19.08■□□□□ 0.65
HMGA2-211ENST00000545998 KLHL41O60662 606 aa19.08■□□□□ 0.65
HMGA2-211ENST00000545998 TBX19O60806 448 aa19.08■□□□□ 0.65
HMGA2-211ENST00000545998 TGDSO95455 350 aa19.08■□□□□ 0.65
HMGA2-211ENST00000545998 PDGFAP04085 211 aa19.08■□□□□ 0.65
HMGA2-211ENST00000545998 ATP1B1P05026 303 aa19.08■□□□□ 0.65
HMGA2-211ENST00000545998 G6PDP11413 515 aa19.08■□□□□ 0.65
HMGA2-211ENST00000545998 SOX11P35716 441 aa19.08■□□□□ 0.65
HMGA2-211ENST00000545998 PGDP52209 483 aa19.08■□□□□ 0.65
HMGA2-211ENST00000545998 DIO3P55073 304 aa19.08■□□□□ 0.65
HMGA2-211ENST00000545998 GUCY1A3Q02108 690 aa19.08■□□□□ 0.65
HMGA2-211ENST00000545998 PDE7AQ13946 482 aa19.08■□□□□ 0.65
HMGA2-211ENST00000545998 AGAP7PQ5VUJ5 663 aa19.08■□□□□ 0.65
HMGA2-211ENST00000545998 EPGNQ6UW88 154 aa19.08■□□□□ 0.65
HMGA2-211ENST00000545998 SAMD14Q8IZD0 417 aaPredicted RBP19.08■□□□□ 0.65
HMGA2-211ENST00000545998 LRRC25Q8N386 305 aaPredicted RBP19.08■□□□□ 0.65
HMGA2-211ENST00000545998 SIRT6Q8N6T7 355 aa19.08■□□□□ 0.65
HMGA2-211ENST00000545998 ZNF321PQ8N8H1 164 aa19.08■□□□□ 0.65
HMGA2-211ENST00000545998 LSM14AQ8ND56 463 aaKnown RBP19.08■□□□□ 0.65
HMGA2-211ENST00000545998 OR1N1Q8NGS0 311 aa19.08■□□□□ 0.65
HMGA2-211ENST00000545998 C9orf43Q8TAL5 461 aaPredicted RBP19.08■□□□□ 0.65
HMGA2-211ENST00000545998 VMP1Q96GC9 406 aa19.08■□□□□ 0.65
HMGA2-211ENST00000545998 SENP5Q96HI0 755 aaPredicted RBP19.08■□□□□ 0.65
HMGA2-211ENST00000545998 AGAP4Q96P64 663 aa19.08■□□□□ 0.65
HMGA2-211ENST00000545998 OR8D2Q9GZM6 311 aa19.08■□□□□ 0.65
HMGA2-211ENST00000545998 REEP4Q9H6H4 257 aa19.08■□□□□ 0.65
HMGA2-211ENST00000545998 KCNK13Q9HB14 408 aa19.08■□□□□ 0.65
HMGA2-211ENST00000545998 HRKO00198 91 aa19.07■□□□□ 0.64
HMGA2-211ENST00000545998 DYRK3O43781 588 aa19.07■□□□□ 0.64
HMGA2-211ENST00000545998 EDF1O60869 148 aaKnown RBP19.07■□□□□ 0.64
HMGA2-211ENST00000545998 IGKV3-11P04433 115 aa19.07■□□□□ 0.64
HMGA2-211ENST00000545998 SFTPCP11686 197 aa19.07■□□□□ 0.64
HMGA2-211ENST00000545998 CLCN2P51788 898 aa19.07■□□□□ 0.64
HMGA2-211ENST00000545998 CRB2Q5IJ48 1285 aa19.07■□□□□ 0.64
HMGA2-211ENST00000545998 ACTRT2Q8TDY3 377 aa19.07■□□□□ 0.64
HMGA2-211ENST00000545998 DOK4Q8TEW6 326 aa19.07■□□□□ 0.64
HMGA2-211ENST00000545998 ZNF721Q8TF20 911 aa19.07■□□□□ 0.64
HMGA2-211ENST00000545998 FBXL20Q96IG2 436 aa19.07■□□□□ 0.64
HMGA2-211ENST00000545998 CCDC134Q9H6E4 229 aa19.07■□□□□ 0.64
HMGA2-211ENST00000545998 GIMAP4Q9NUV9 329 aa19.07■□□□□ 0.64
HMGA2-211ENST00000545998 PTGFRNQ9P2B2 879 aa19.07■□□□□ 0.64
HMGA2-211ENST00000545998 ENTPD4Q9Y227 616 aa19.07■□□□□ 0.64
HMGA2-211ENST00000545998 TP53TG5Q9Y2B4 290 aa19.07■□□□□ 0.64
HMGA2-211ENST00000545998 PCDHGB7Q9Y5F8 929 aa19.07■□□□□ 0.64
HMGA2-211ENST00000545998 TRBV11-1A0A0K0K1C0 115 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 ALPPP05187 535 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 ALDOCP09972 364 aaKnown RBP19.06■□□□□ 0.64
HMGA2-211ENST00000545998 CT62P0C5K7 136 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 NT5EP21589 574 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 ZNF267Q14586 743 aaPredicted RBP19.06■□□□□ 0.64
HMGA2-211ENST00000545998 ANKRD26P1Q6NSI1 321 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 SPATA19Q7Z5L4 167 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 GALNT12Q8IXK2 581 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 CCDC116Q8IYX3 515 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 SUN3Q8TAQ9 357 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 MTERF3Q96E29 417 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 OR52B2Q96RD2 323 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 ZNF451Q9Y4E5 1061 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 GABRR3A8MPY1 467 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 A8MUI8 341 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 MYO1GB0I1T2 1018 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 SCAMP2O15127 329 aaKnown RBP19.06■□□□□ 0.64
HMGA2-211ENST00000545998 DIAPH2O60879 1101 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 SOX18P35713 384 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 HPCAL1P37235 193 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 MDH1P40925 334 aaKnown RBP19.06■□□□□ 0.64
HMGA2-211ENST00000545998 C21orf58P58505 322 aa19.06■□□□□ 0.64
HMGA2-211ENST00000545998 MGAT2Q10469 447 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms