RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 TMCC2O75069 709 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 ZNF821O75541 412 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-225ENST00000545920 GCM2O75603 506 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-225ENST00000545920 RFPL3O75679 317 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 DIRAS1O95057 198 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 ALX3O95076 343 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 FGF19O95750 216 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 RAB36O95755 333 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 VIPP01282 170 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 SOD2P04179 222 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 C1SP09871 688 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 C1GALT1C1LP0DN25 315 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 SRCP12931 536 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 HLA-EP13747 358 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 CPEP16870 476 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 CPN2P22792 545 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 CXCR2P25025 360 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 DDX6P26196 483 aaKnown RBP eCLIP6.15□□□□□ -1.42
SNHG1-225ENST00000545920 FGF9P31371 208 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-225ENST00000545920 SDC2P34741 201 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 OR1D2P34982 312 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 CHI3L1P36222 383 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-225ENST00000545920 IFNGR2P38484 337 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 RECQLP46063 649 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-225ENST00000545920 SLC9A3P48764 834 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 DGKGP49619 791 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 SEPHS1P49903 392 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 ARFIP1P53367 373 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 CRYBA2P53672 197 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 GNG2P59768 71 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 DSTNP60981 165 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 TRA2BP62995 288 aaKnown RBP6.15□□□□□ -1.42
SNHG1-225ENST00000545920 RAE1P78406 368 aaKnown RBP6.15□□□□□ -1.42
SNHG1-225ENST00000545920 MRPS15P82914 257 aaKnown RBP6.15□□□□□ -1.42
SNHG1-225ENST00000545920 IFITM2Q01629 132 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 UBE3AQ05086 875 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 RAB40BQ12829 278 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 CNTN1Q12860 1018 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 GAB1Q13480 694 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 NAE1Q13564 534 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 MLC1Q15049 377 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 ANGPT1Q15389 498 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 MED22Q15528 200 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 GLYR1Q49A26 553 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-225ENST00000545920 HSD17B12Q53GQ0 312 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 DCST1Q5T197 706 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 ATAD3CQ5T2N8 411 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 PRAMEF9Q5VWM5 478 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 MBOAT1Q6ZNC8 495 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 ZNF765Q7L2R6 523 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 RTL10Q7L3V2 364 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.15□□□□□ -1.42
SNHG1-225ENST00000545920 CLECL1Q8IZS7 167 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 NAGSQ8N159 534 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 KRT78Q8N1N4 520 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 NANOGP1Q8N7R0 232 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 TOR1AIP2Q8NFQ8 470 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 HUS1BQ8NHY5 278 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 WDR36Q8NI36 951 aaKnown RBP6.15□□□□□ -1.42
SNHG1-225ENST00000545920 ANGPTL6Q8NI99 470 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 CXorf40AQ8TE69 158 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 CAPSLQ8WWF8 208 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 ACOT12Q8WYK0 555 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 MRPS31Q92665 395 aaKnown RBP6.15□□□□□ -1.42
SNHG1-225ENST00000545920 LMLNQ96KR4 655 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 KCTD7Q96MP8 289 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 CAMK1GQ96NX5 476 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 OPALINQ96PE5 141 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 SDHCQ99643 169 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-225ENST00000545920 TCF25Q9BQ70 676 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 DPH2Q9BQC3 489 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-225ENST00000545920 CENPOQ9BU64 300 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 SGPP1Q9BX95 441 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 TM6SF2Q9BZW4 377 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 NDEL1Q9GZM8 345 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 SRRQ9GZT4 340 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 WNT10AQ9GZT5 417 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 RNF38Q9H0F5 515 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 PCBD2Q9H0N5 130 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 ANKRD19PQ9H560 264 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 NT5DC2Q9H857 520 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 ANKRA2Q9H9E1 313 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 HHATLQ9HCP6 504 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 DMRT3Q9NQL9 472 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 GKN1Q9NS71 199 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 ACSS1Q9NUB1 689 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-225ENST00000545920 TRMT13Q9NUP7 481 aaKnown RBP6.15□□□□□ -1.42
SNHG1-225ENST00000545920 RABL2AQ9UBK7 228 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-225ENST00000545920 POU2F3Q9UKI9 436 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 RABL2BQ9UNT1 228 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 EXOSC1Q9Y3B2 195 aaKnown RBP6.15□□□□□ -1.42
SNHG1-225ENST00000545920 N6AMT1Q9Y5N5 214 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 CFAP20Q9Y6A4 193 aaKnown RBP6.15□□□□□ -1.42
SNHG1-225ENST00000545920 KIAA1671Q9BY89 1806 aa6.14□□□□□ -1.43
SNHG1-225ENST00000545920 LOC100289279A0A1B0GTE1 492 aa6.14□□□□□ -1.43
SNHG1-225ENST00000545920 A0A1W2PRB8 838 aa6.14□□□□□ -1.43
SNHG1-225ENST00000545920 TRBC2A0A5B9 178 aa6.14□□□□□ -1.43
SNHG1-225ENST00000545920 PIPSLA2A3N6 862 aa6.14□□□□□ -1.43
SNHG1-225ENST00000545920 C2orf78A6NCI8 922 aa6.14□□□□□ -1.43
SNHG1-225ENST00000545920 ARHGEF33A8MVX0 844 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms