RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 BORAQ6PGQ7 559 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 NRROSQ86YC3 692 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 ANKRD13BQ86YJ7 626 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 UBALD2Q8IYN6 164 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 NAXEQ8NCW5 288 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 PSD4Q8NDX1 1056 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 MSANTD3Q96H12 275 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 DSN1Q9H410 356 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 ANKMY1Q9P2S6 941 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 SCN5AQ14524 2016 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 TDRD15B5MCY1 1934 aaKnown RBP8.22□□□□□ -1.09
CLIP1-218ENST00000545889 ZNF236Q9UL36 1845 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 DOPEY2Q9Y3R5 2298 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 CCDC182A6NF36 153 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 LOC730098B7Z3J9 87 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 OR7A10O76100 309 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 POU2F1P14859 743 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 XRCC1P18887 633 aaPredicted RBP8.22□□□□□ -1.09
CLIP1-218ENST00000545889 ARSDP51689 593 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 COL9A2Q14055 689 aaPredicted RBP8.22□□□□□ -1.09
CLIP1-218ENST00000545889 SMCO1Q147U7 214 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 TMEM31Q5JXX7 168 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 PIWIL3Q7Z3Z3 882 aaKnown RBP8.22□□□□□ -1.09
CLIP1-218ENST00000545889 TBC1D21Q8IYX1 336 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 DNAAF1Q8NEP3 725 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 SLC35A5Q9BS91 424 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 C1QTNF1Q9BXJ1 281 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 FAM117AQ9C073 453 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 RDH14Q9HBH5 336 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 POFUT2Q9Y2G5 429 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 WBP11Q9Y2W2 641 aaKnown RBP8.22□□□□□ -1.09
CLIP1-218ENST00000545889 PCDHGB7Q9Y5F8 929 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 PCDHGB1Q9Y5G3 927 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 CORINQ9Y5Q5 1042 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 A0A1W2PRG6 482 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 CAPN5O15484 640 aaPredicted RBP8.22□□□□□ -1.09
CLIP1-218ENST00000545889 PLIN3O60664 434 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 GADD45GO95257 159 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 TGDSO95455 350 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 AHSGP02765 367 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 PRSS56P0CW18 603 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 ACVR2AP27037 513 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 CCR10P46092 362 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 STC1P52823 247 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 RPS15AP62244 130 aaKnown RBP8.22□□□□□ -1.09
CLIP1-218ENST00000545889 SMAD4Q13485 552 aaKnown RBP8.22□□□□□ -1.09
CLIP1-218ENST00000545889 C3orf38Q5JPI3 329 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 RBM20Q5T481 1227 aaKnown RBP8.22□□□□□ -1.09
CLIP1-218ENST00000545889 OR52E4Q8NGH9 312 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 GTPBP3Q969Y2 492 aaKnown RBP8.22□□□□□ -1.09
CLIP1-218ENST00000545889 MAP6Q96JE9 813 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 BEX2Q9BXY8 128 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 RPF2Q9H7B2 306 aaKnown RBP8.22□□□□□ -1.09
CLIP1-218ENST00000545889 MGAMO43451 1857 aa8.21□□□□□ -1.09
CLIP1-218ENST00000545889 KIR2DS5A0A0G2JLQ3 304 aa8.21□□□□□ -1.09
CLIP1-218ENST00000545889 A0A0G2JNG1 304 aa8.21□□□□□ -1.09
CLIP1-218ENST00000545889 KIR2DS3K7RE56 304 aa8.21□□□□□ -1.09
CLIP1-218ENST00000545889 PLD2O14939 933 aa8.21□□□□□ -1.09
CLIP1-218ENST00000545889 YKT6O15498 198 aa8.21□□□□□ -1.09
CLIP1-218ENST00000545889 CHST10O43529 356 aa8.21□□□□□ -1.09
CLIP1-218ENST00000545889 GATBO75879 557 aaKnown RBP8.21□□□□□ -1.09
CLIP1-218ENST00000545889 CSTAP01040 98 aa8.21□□□□□ -1.09
CLIP1-218ENST00000545889 IGLV3-25P01717 112 aa8.21□□□□□ -1.09
CLIP1-218ENST00000545889 ZNF28P17035 718 aa8.21□□□□□ -1.09
CLIP1-218ENST00000545889 OR2B6P58173 313 aa8.21□□□□□ -1.09
CLIP1-218ENST00000545889 FOXC1Q12948 553 aa8.21□□□□□ -1.09
CLIP1-218ENST00000545889 NFATC3Q12968 1075 aa8.21□□□□□ -1.09
CLIP1-218ENST00000545889 TARDBPQ13148 414 aaKnown RBP eCLIP8.21□□□□□ -1.09
CLIP1-218ENST00000545889 PMS2P3Q13401 168 aa8.21□□□□□ -1.09
CLIP1-218ENST00000545889 ARFRP1Q13795 201 aa8.21□□□□□ -1.09
CLIP1-218ENST00000545889 KIR2DS5Q14953 304 aa8.21□□□□□ -1.09
CLIP1-218ENST00000545889 OGFRL1Q5TC84 451 aaPredicted RBP8.21□□□□□ -1.09
CLIP1-218ENST00000545889 PARM1Q6UWI2 310 aa8.21□□□□□ -1.09
CLIP1-218ENST00000545889 TSPAN33Q86UF1 283 aa8.21□□□□□ -1.09
CLIP1-218ENST00000545889 BOLLQ8N9W6 283 aaKnown RBP8.21□□□□□ -1.09
CLIP1-218ENST00000545889 NAA11Q9BSU3 229 aaPredicted RBP8.21□□□□□ -1.09
CLIP1-218ENST00000545889 LGR4Q9BXB1 951 aa8.21□□□□□ -1.09
CLIP1-218ENST00000545889 EMC3Q9P0I2 261 aa8.21□□□□□ -1.09
CLIP1-218ENST00000545889 ENTPD2Q9Y5L3 495 aa8.21□□□□□ -1.09
CLIP1-218ENST00000545889 ANKRD12Q6UB98 2062 aa8.21□□□□□ -1.09
CLIP1-218ENST00000545889 CEP350Q5VT06 3117 aa8.21□□□□□ -1.09
CLIP1-218ENST00000545889 HAT1O14929 419 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 PSIP1O75475 530 aaKnown RBP8.21□□□□□ -1.1
CLIP1-218ENST00000545889 SCO1O75880 301 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 CD46P15529 392 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 SLC15A1P46059 708 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 KCNC1P48547 511 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 FNTBP49356 437 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 E2F1Q01094 437 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 FLYWCH1Q4VC44 716 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 KLHL17Q6TDP4 642 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 FRMD7Q6ZUT3 714 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 GPR149Q86SP6 731 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 CCDC116Q8IYX3 515 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 CBR4Q8N4T8 237 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 KCNC2Q96PR1 638 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 ZNF347Q96SE7 839 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 POLR2J3Q9H1A7 115 aaKnown RBP8.21□□□□□ -1.1
CLIP1-218ENST00000545889 ALG2Q9H553 416 aa8.21□□□□□ -1.1
CLIP1-218ENST00000545889 KCND3Q9UK17 655 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms