RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 GATAD2AQ86YP4 633 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 NRSN1Q8IZ57 195 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 PIK3R3Q92569 461 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 GPA33Q99795 319 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 EPHX3Q9H6B9 360 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 LHX9Q9NQ69 397 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 YARS2Q9Y2Z4 477 aaKnown RBP14.98□□□□□ -0.01
LDLR-204ENST00000545707 ARRDC5A6NEK1 342 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 GLOD5A6NK44 160 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 PRRT4C9JH25 899 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 SLITRK5O94991 958 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 TP53P04637 393 aaPredicted RBP14.97□□□□□ -0.01
LDLR-204ENST00000545707 PSMA1P25786 263 aaKnown RBP14.97□□□□□ -0.01
LDLR-204ENST00000545707 SNRPGP62308 76 aaKnown RBP14.97□□□□□ -0.01
LDLR-204ENST00000545707 RHAGQ02094 409 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 KRT78Q8N1N4 520 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 OR5P2Q8WZ92 322 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 ZNF486Q96H40 463 aaPredicted RBP14.97□□□□□ -0.01
LDLR-204ENST00000545707 TREX2Q9BQ50 279 aaPredicted RBP14.97□□□□□ -0.01
LDLR-204ENST00000545707 MACROD1Q9BQ69 325 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 OR52A5Q9H2C5 316 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 A4GALTQ9NPC4 353 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 TBX21Q9UL17 535 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 V9GYH0 126 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 CDRT1O95170 752 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 SNX4O95219 450 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 NTN1O95631 604 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 PIPP12273 146 aaPredicted RBP14.97□□□□□ -0.01
LDLR-204ENST00000545707 KCNJ5P48544 419 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 CCT3P49368 545 aaKnown RBP14.97□□□□□ -0.01
LDLR-204ENST00000545707 PRKAG1P54619 331 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 DHCR24Q15392 516 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 ZNF79Q15937 498 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 FLYWCH1Q4VC44 716 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 TOR1AIP1Q5JTV8 583 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 AGAP6Q5VW22 663 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 C12orf73Q69YU5 71 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 ACSM5Q6NUN0 579 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 PODNL1Q6PEZ8 512 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 IKBIPQ70UQ0 350 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 C17orf64Q86WR6 236 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 CACUL1Q86Y37 369 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 FAM20CQ8IXL6 584 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 SMPDL3AQ92484 453 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 TFGQ92734 400 aaPredicted RBP14.97□□□□□ -0.01
LDLR-204ENST00000545707 HHIPL1Q96JK4 782 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 ZNF354BQ96LW1 612 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 AGAP4Q96P64 663 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 CRNNQ9UBG3 495 aaPredicted RBP14.97□□□□□ -0.01
LDLR-204ENST00000545707 TRPC4Q9UBN4 977 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 MGAT4BQ9UQ53 548 aa14.97□□□□□ -0.01
LDLR-204ENST00000545707 A0A075B6Q4 140 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 TFECO14948 347 aaPredicted RBP14.96□□□□□ -0.01
LDLR-204ENST00000545707 FHP07954 510 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 PPM1AP35813 382 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 ST8SIA6P61647 398 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 DAB2P98082 770 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 HEPACAMQ14CZ8 416 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 CCDC92Q53HC0 331 aaPredicted RBP14.96□□□□□ -0.01
LDLR-204ENST00000545707 C6orf183Q5T699 404 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 TMPRSS11AQ6ZMR5 421 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 NANOGP1Q8N7R0 232 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 OR9Q1Q8NGQ5 310 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 OR2L2Q8NH16 312 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 UBE2E3Q969T4 207 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 RAD51AP1Q96B01 352 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 ZFYVE19Q96K21 471 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 MS4A8Q9BY19 250 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 ZCCHC2Q9C0B9 1178 aaKnown RBP14.96□□□□□ -0.01
LDLR-204ENST00000545707 DYRK4Q9NR20 520 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 KLHL3Q9UH77 587 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 A4GNTQ9UNA3 340 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 ZNF232Q9UNY5 417 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 WBP11Q9Y2W2 641 aaKnown RBP14.96□□□□□ -0.01
LDLR-204ENST00000545707 ABHD14A-ACY1A0A1B0GW23 586 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 FAAHO00519 579 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 NME6O75414 186 aaPredicted RBP14.96□□□□□ -0.01
LDLR-204ENST00000545707 CISD3P0C7P0 127 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 PTPN2P17706 415 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 MMP11P24347 488 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 TIE1P35590 1138 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 ETV5P41161 510 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 SLC6A11P48066 632 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 RFX2P48378 723 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 ETV1P50549 477 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 NCF4Q15080 339 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 DEFB115Q30KQ5 88 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 MFSD4BQ5TF39 518 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 GRASPQ7Z6J2 395 aaPredicted RBP14.96□□□□□ -0.01
LDLR-204ENST00000545707 ZER1Q7Z7L7 766 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 PHC2Q8IXK0 858 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 UBE2J2Q8N2K1 259 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 SETD7Q8WTS6 366 aaKnown RBP14.96□□□□□ -0.01
LDLR-204ENST00000545707 DMRTB1Q96MA1 342 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 AHSPQ9NZD4 102 aa14.96□□□□□ -0.01
LDLR-204ENST00000545707 LCMT2O60294 686 aaKnown RBP14.95□□□□□ -0.02
LDLR-204ENST00000545707 HTR3AP46098 478 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 GSTM5P46439 218 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 RORCP51449 518 aa14.95□□□□□ -0.02
LDLR-204ENST00000545707 PCBP4P57723 403 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms