RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 MRTO4Q9UKD2 239 aaKnown RBP5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 BOKQ9UMX3 212 aaPredicted RBP5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 MAPRE3Q9UPY8 281 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 OSGIN2Q9Y236 505 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 TMED5Q9Y3A6 229 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 DOCK10Q96BY6 2186 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 ANKHD1Q8IWZ3 2542 aaKnown RBP5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 SHANK1Q9Y566 2161 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 A0A0A6YYD5 115 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 TRGV8A0A0C4DH27 118 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 C2orf92A0A1B0GVN3 265 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 SERTM1A2A2V5 107 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 OR14I1A6ND48 311 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 ASPDHA6ND91 283 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 OR2W5A6NFC9 320 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 SMIM23A6NLE4 172 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 TTC36A6NLP5 189 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 TMEM114B3SHH9 223 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 MASP2O00187 686 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 SLC28A1O00337 649 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 RTCAO00442 366 aaKnown RBP5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 MANBAO00462 879 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 OR7A17O14581 309 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 ACOX3O15254 700 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 RGS16O15492 202 aaPredicted RBP5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 ASNA1O43681 348 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 PEX1O43933 1283 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 DLX3O60479 287 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 TRIM13O60858 407 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 SH3BGRLO75368 114 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 OR2J2O76002 312 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 UNC5CO95185 931 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 SNX4O95219 450 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 B3GALT4O96024 378 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 PDYNP01213 254 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 STSP08842 583 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 HOXD4P09016 255 aaPredicted RBP5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 NUDT17P0C025 328 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 RNF224P0DH78 156 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 UROSP10746 265 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 AGAP20933 346 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 CNR1P21554 472 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 NTSP30990 170 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 BSGP35613 385 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 ALDH9A1P49189 494 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 CLK3P49761 638 aaKnown RBP5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 GPR143P51810 404 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 NEK2P51955 445 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 NAGLUP54802 743 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 PSMD4P55036 377 aaKnown RBP5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 IGLV3-21P80748 117 aaPredicted RBP5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 ZNF763Q0D2J5 394 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 TRAF3Q13114 568 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 ZNF267Q14586 743 aaPredicted RBP5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 ZNHIT3Q15649 155 aaPredicted RBP5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 SPRED3Q2MJR0 410 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 PIGGQ5H8A4 983 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 SLC22A10Q63ZE4 541 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 TMEM198Q66K66 360 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 FCRLBQ6BAA4 426 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 MRM1Q6IN84 353 aaKnown RBP5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 XKRXQ6PP77 449 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 SCIMPQ6UWF3 145 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 IL20RBQ6UXL0 311 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 ZYG11AQ6WRX3 759 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 ZNF793Q6ZN11 406 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 FAM47EQ6ZV65 393 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 IKBIPQ70UQ0 350 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 MAMDC2Q7Z304 686 aaPredicted RBP5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 COMMD6Q7Z4G1 85 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 GALNTL5Q7Z4T8 443 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 VN1R5Q7Z5H4 357 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 PACS2Q86VP3 889 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 FAM9CQ8IZT9 166 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 PLD6Q8N2A8 252 aaKnown RBP5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 LRRC25Q8N386 305 aaPredicted RBP5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 VWA5B2Q8N398 1253 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 LIX1Q8N485 282 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 PIP4P2Q8N4L2 257 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 NATD1Q8N6N6 113 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 CDYL2Q8N8U2 506 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 PSD4Q8NDX1 1056 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 MDS2Q8NDY4 140 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 NFAM1Q8NET5 270 aaPredicted RBP5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 OR52B6Q8NGF0 335 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 PTPMT1Q8WUK0 201 aaPredicted RBP5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 SARAFQ96BY9 339 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 KLHL29Q96CT2 875 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 TMCO6Q96DC7 493 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 C19orf60Q96EN9 201 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 HSPBAP1Q96EW2 488 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 GPR137Q96N19 417 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 BBS4Q96RK4 519 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 GAL3ST4Q96RP7 486 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 SECISBP2Q96T21 854 aaKnown RBP5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 PRPF18Q99633 342 aaKnown RBP5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 LDAHQ9H6V9 325 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 EXO5Q9H790 373 aa5.21□□□□□ -1.58
CLSTN3-215ENST00000544584 SYNPO2LQ9H987 977 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms