RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 GPR155Q7Z3F1 870 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 CCDC116Q8IYX3 515 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 OR7A2PQ8NGA2 310 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 OR14A16Q8NHC5 309 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 PTPMT1Q8WUK0 201 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 SNRNP27Q8WVK2 155 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 CIDECQ96AQ7 238 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 IMMP1LQ96LU5 166 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 ZNF681Q96N22 645 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 ZBTB18Q99592 522 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 CNPPD1Q9BV87 410 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 BRINP2Q9C0B6 783 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 ING2Q9H160 280 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 ATAD3AQ9NVI7 634 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 TAS2R7Q9NYW3 318 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 ATP6V1HQ9UI12 483 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 KCNMB2Q9Y691 235 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 ZFHX4Q86UP3 3567 aa13.52□□□□□ -0.24
TNFRSF1A-216ENST00000543995 CHD8Q9HCK8 2581 aa13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 TBX19O60806 448 aa13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ATP1B1P05026 303 aa13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ITGA3P26006 1051 aa13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 NCBP2P52298 156 aaKnown RBP eCLIP13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 CLNS1AP54105 237 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 C21orf58P58505 322 aa13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 AIMP2Q13155 320 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ZNF267Q14586 743 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 COL28A1Q2UY09 1125 aa13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ZNF385BQ569K4 471 aa13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 BORAQ6PGQ7 559 aa13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 DGAT2L6Q6ZPD8 337 aa13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 GALNT12Q8IXK2 581 aa13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 RIMKLAQ8IXN7 391 aa13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 MIER2Q8N344 545 aa13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 B3GNT7Q8NFL0 401 aa13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 DOK4Q8TEW6 326 aa13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 NUDT8Q8WV74 236 aa13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 APOBEC4Q8WW27 367 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ZNF764Q96H86 408 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ELAC2Q9BQ52 826 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 OR8D2Q9GZM6 311 aa13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 PRORYQ9H606 182 aa13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ADAM21Q9UKJ8 722 aa13.52□□□□□ -0.25
TNFRSF1A-216ENST00000543995 MYO1GB0I1T2 1018 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ANKRD28O15084 1053 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SLC22A3O75751 556 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 CELA2AP08217 269 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 LAMP1P11279 417 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 GALNSP34059 522 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 PTGER1P34995 402 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 CCL11P51671 97 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 AP2B1P63010 937 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 DUSP2Q05923 314 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 LTB4RQ15722 352 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 CEBPEQ15744 281 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 IRAK1BP1Q5VVH5 260 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 PLAG1Q6DJT9 500 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SPATA21Q7Z572 469 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 KBTBD2Q8IY47 623 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 NATD1Q8N6N6 113 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 MORN4Q8NDC4 146 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ADCY4Q8NFM4 1077 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ZFP28Q8NHY6 868 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 M1APQ8TC57 530 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SLC2A12Q8TD20 617 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ZBED6CLQ96FA7 236 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 THOC3Q96J01 351 aaKnown RBP13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ART5Q96L15 291 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 DUSP26Q9BV47 211 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 RABEP2Q9H5N1 569 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 CXorf21Q9HAI6 301 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SDR39U1Q9NRG7 319 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 COPS7AQ9UBW8 275 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ERVK-19Q9WJR5 959 aa13.51□□□□□ -0.25
TNFRSF1A-216ENST00000543995 A6NL46 340 aa13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 C9JVG2 144 aa13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 DNAJB5O75953 348 aa13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 EFNA1P20827 205 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 DRD4P21917 467 aa13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 KIR3DL1P43629 444 aa13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 MANFP55145 182 aaKnown RBP13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SRSF11Q05519 484 aaKnown RBP13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 Q0VFX4 171 aa13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 HSPB3Q12988 150 aa13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SPRED3Q2MJR0 410 aa13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 DPY19L1Q2PZI1 675 aa13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 PRICKLE4Q2TBC4 344 aa13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 FAM174BQ3ZCQ3 159 aa13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 GALNT16Q8N428 558 aa13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 AMER2Q8N7J2 671 aa13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 NFAM1Q8NET5 270 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 OR9A2Q8NGT5 310 aa13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 C10orf82Q8WW14 230 aa13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 EXTL1Q92935 676 aa13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 NCLNQ969V3 563 aa13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 TESCQ96BS2 214 aa13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 COQ8BQ96D53 544 aa13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 VMP1Q96GC9 406 aa13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SENP5Q96HI0 755 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF1A-216ENST00000543995 TEX37Q96LM6 180 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms