RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 ZNF195O14628 629 aa14.06□□□□□ -0.16
CD9-210ENST00000543916 LRATO95237 230 aa14.06□□□□□ -0.16
CD9-210ENST00000543916 CT62P0C5K7 136 aa14.06□□□□□ -0.16
CD9-210ENST00000543916 SFTPCP11686 197 aa14.06□□□□□ -0.16
CD9-210ENST00000543916 MAPK1P28482 360 aa14.06□□□□□ -0.16
CD9-210ENST00000543916 GALNSP34059 522 aa14.06□□□□□ -0.16
CD9-210ENST00000543916 EMX2Q04743 252 aa14.06□□□□□ -0.16
CD9-210ENST00000543916 SPRED3Q2MJR0 410 aa14.06□□□□□ -0.16
CD9-210ENST00000543916 SOWAHCQ53LP3 525 aaPredicted RBP14.06□□□□□ -0.16
CD9-210ENST00000543916 CRB2Q5IJ48 1285 aa14.06□□□□□ -0.16
CD9-210ENST00000543916 IL23RQ5VWK5 629 aa14.06□□□□□ -0.16
CD9-210ENST00000543916 FCRLBQ6BAA4 426 aa14.06□□□□□ -0.16
CD9-210ENST00000543916 LINC00696Q6ZRV3 163 aa14.06□□□□□ -0.16
CD9-210ENST00000543916 FAM47EQ6ZV65 393 aa14.06□□□□□ -0.16
CD9-210ENST00000543916 ASB18Q6ZVZ8 466 aa14.06□□□□□ -0.16
CD9-210ENST00000543916 ZNF721Q8TF20 911 aa14.06□□□□□ -0.16
CD9-210ENST00000543916 SLC39A7Q92504 469 aa14.06□□□□□ -0.16
CD9-210ENST00000543916 VMP1Q96GC9 406 aa14.06□□□□□ -0.16
CD9-210ENST00000543916 RBM18Q96H35 190 aaKnown RBP14.06□□□□□ -0.16
CD9-210ENST00000543916 WDR55Q9H6Y2 383 aaPredicted RBP14.06□□□□□ -0.16
CD9-210ENST00000543916 MIEF1Q9NQG6 463 aa14.06□□□□□ -0.16
CD9-210ENST00000543916 WBP11Q9Y2W2 641 aaKnown RBP14.06□□□□□ -0.16
CD9-210ENST00000543916 ZNF451Q9Y4E5 1061 aa14.06□□□□□ -0.16
CD9-210ENST00000543916 ZNF780BQ9Y6R6 833 aa14.06□□□□□ -0.16
CD9-210ENST00000543916 GOLGA8QA0A0J9YX86 632 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 GOLGA8OA6NCC3 632 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 TRPC5OSA6NMA1 111 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 A8MUI8 341 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 GOLGA8NF8WBI6 632 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 SLCO1B7G3V0H7 640 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 AKAP10O43572 662 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 PRKNO60260 465 aaPredicted RBP14.05□□□□□ -0.16
CD9-210ENST00000543916 MAN1A2O60476 641 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 IGKV3-11P04433 115 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 ATP1B1P05026 303 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 ALPPP05187 535 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 CSNK2A2P19784 350 aaPredicted RBP14.05□□□□□ -0.16
CD9-210ENST00000543916 EPHA3P29320 983 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 SOX18P35713 384 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 CD97P48960 835 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 CLCN2P51788 898 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 ERVK-8P63133 956 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 MFAP5Q13361 173 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 ZNF267Q14586 743 aaPredicted RBP14.05□□□□□ -0.16
CD9-210ENST00000543916 PTGR1Q14914 329 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 LTB4RQ15722 352 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 SMU1Q2TAY7 513 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 SLC9B1Q4ZJI4 515 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 ZNF385BQ569K4 471 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 ANKRD26P1Q6NSI1 321 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 IGFL2Q6UWQ7 119 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 ISLR2Q6UXK2 745 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 RGS9BPQ6ZS82 235 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 LARP4Q71RC2 724 aaKnown RBP eCLIP14.05□□□□□ -0.16
CD9-210ENST00000543916 LRRC25Q8N386 305 aaPredicted RBP14.05□□□□□ -0.16
CD9-210ENST00000543916 ARFGAP2Q8N6H7 521 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 OR1N1Q8NGS0 311 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 RIT1Q92963 219 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 SENP5Q96HI0 755 aaPredicted RBP14.05□□□□□ -0.16
CD9-210ENST00000543916 FBXL20Q96IG2 436 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 CXorf21Q9HAI6 301 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 SLC35C2Q9NQQ7 365 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 ASIC5Q9NY37 505 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 ERVK-19Q9WJR5 959 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 PCDHGB7Q9Y5F8 929 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 USH1CQ9Y6N9 552 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 CROCCQ5TZA2 2017 aa14.05□□□□□ -0.16
CD9-210ENST00000543916 KLHL41O60662 606 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 VPS4BO75351 444 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 CLPSP04118 112 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 PRB1P04280 392 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 G6PDP11413 515 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 PRPS2P11908 318 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 NT5EP21589 574 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 ASMTP46597 345 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 DIO3P55073 304 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 MGAT2Q10469 447 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 MAD2L1Q13257 205 aaPredicted RBP14.04□□□□□ -0.16
CD9-210ENST00000543916 PDE7AQ13946 482 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 CEBPEQ15744 281 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 PRICKLE4Q2TBC4 344 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 GALNT12Q8IXK2 581 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 CCDC116Q8IYX3 515 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 LRRC34Q8IZ02 419 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 ADCY4Q8NFM4 1077 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 SUN3Q8TAQ9 357 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 NUDT8Q8WV74 236 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 MAELQ96JY0 434 aaKnown RBP14.04□□□□□ -0.16
CD9-210ENST00000543916 CNPPD1Q9BV87 410 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 DEFB126Q9BYW3 111 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 REEP4Q9H6H4 257 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 TAS2R7Q9NYW3 318 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 MAT2BQ9NZL9 334 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 NOP53Q9NZM5 478 aaKnown RBP14.04□□□□□ -0.16
CD9-210ENST00000543916 ENTPD4Q9Y227 616 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 EIF3LQ9Y262 564 aaKnown RBP14.04□□□□□ -0.16
CD9-210ENST00000543916 CSAG2Q9Y5P2 127 aa14.04□□□□□ -0.16
CD9-210ENST00000543916 KALRNO60229 2985 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 TMEM200CA6NKL6 621 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 MYO1GB0I1T2 1018 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms