RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 FAAH2Q6GMR7 532 aa16.39■□□□□ 0.21
CLSTN3-210ENST00000540931 CAMKMTQ7Z624 323 aa16.39■□□□□ 0.21
CLSTN3-210ENST00000540931 CLNKQ7Z7G1 428 aa16.39■□□□□ 0.21
CLSTN3-210ENST00000540931 LSM14AQ8ND56 463 aaKnown RBP16.39■□□□□ 0.21
CLSTN3-210ENST00000540931 B3GNT7Q8NFL0 401 aa16.39■□□□□ 0.21
CLSTN3-210ENST00000540931 OR8K3Q8NH51 312 aa16.39■□□□□ 0.21
CLSTN3-210ENST00000540931 RIT1Q92963 219 aa16.39■□□□□ 0.21
CLSTN3-210ENST00000540931 TESCQ96BS2 214 aa16.39■□□□□ 0.21
CLSTN3-210ENST00000540931 ZNF317Q96PQ6 595 aaPredicted RBP16.39■□□□□ 0.21
CLSTN3-210ENST00000540931 C1orf50Q9BV19 199 aa16.39■□□□□ 0.21
CLSTN3-210ENST00000540931 ING2Q9H160 280 aa16.39■□□□□ 0.21
CLSTN3-210ENST00000540931 WDR55Q9H6Y2 383 aaPredicted RBP16.39■□□□□ 0.21
CLSTN3-210ENST00000540931 CPNE5Q9HCH3 593 aa16.39■□□□□ 0.21
CLSTN3-210ENST00000540931 NPHS2Q9NP85 383 aa16.39■□□□□ 0.21
CLSTN3-210ENST00000540931 MMP25Q9NPA2 562 aa16.39■□□□□ 0.21
CLSTN3-210ENST00000540931 PNO1Q9NRX1 252 aaKnown RBP16.39■□□□□ 0.21
CLSTN3-210ENST00000540931 FGFR1OP2Q9NVK5 253 aa16.39■□□□□ 0.21
CLSTN3-210ENST00000540931 AIG1Q9NVV5 245 aa16.39■□□□□ 0.21
CLSTN3-210ENST00000540931 ZIM2Q9NZV7 527 aa16.39■□□□□ 0.21
CLSTN3-210ENST00000540931 TUBD1Q9UJT1 453 aa16.39■□□□□ 0.21
CLSTN3-210ENST00000540931 DYTNA2CJ06 578 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 GMNCA6NCL1 334 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 GLOD5A6NK44 160 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 ALPPP05187 535 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 LSP1P33241 339 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 ATP4BP51164 291 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 CLCN2P51788 898 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 HNRNPFP52597 415 aaKnown RBP16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 ARFIP2P53365 341 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 PSPHP78330 225 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 MLC1Q15049 377 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 PCOLCEQ15113 449 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 DEFB109BQ30KR1 87 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 ANXA8L1Q5VT79 327 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 CPLX4Q7Z7G2 160 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 TICAM1Q8IUC6 712 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 GALNT12Q8IXK2 581 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 TMEM52Q8NDY8 209 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 OR7G1Q8NGA0 311 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 TSLPQ969D9 159 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 VMP1Q96GC9 406 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 IMMP1LQ96LU5 166 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 BHLHE41Q9C0J9 482 aaPredicted RBP16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 LHPPQ9H008 270 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 ADNPQ9H2P0 1102 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 SH3BP4Q9P0V3 963 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 KCNMB2Q9Y691 235 aa16.38■□□□□ 0.21
CLSTN3-210ENST00000540931 A0A0G2JND7 137 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 OR6C76A6NM76 312 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 MYO1GB0I1T2 1018 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 C17orf105B2RV13 164 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 PDPK1O15530 556 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 SOX30O94993 753 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 IL6P05231 212 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 WT1P19544 449 aaPredicted RBP16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 TACR1P25103 407 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 SLC26A5P58743 744 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 EEF1A2Q05639 463 aaKnown RBP16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 MAP4K2Q12851 820 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 BTBD16Q32M84 506 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 VWA5B1Q5TIE3 1220 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 LANCL3Q6ZV70 420 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 LGI4Q8N135 537 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 MIER2Q8N344 545 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 OR8J2Q8NGG1 315 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 OR5L2Q8NGL0 311 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 ZNF675Q8TD23 568 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 EXOSC8Q96B26 276 aaKnown RBP16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 COQ8BQ96D53 544 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 WBP1Q96G27 269 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 FBXL20Q96IG2 436 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 SDR39U1Q9NRG7 319 aaPredicted RBP16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 HEY2Q9UBP5 337 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 BAIAP2L1Q9UHR4 511 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 PCDHGB4Q9UN71 923 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 PCDHGA9Q9Y5G4 932 aaKnown RBP16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 CLDN16Q9Y5I7 305 aa16.37■□□□□ 0.21
CLSTN3-210ENST00000540931 CCDC88CQ9P219 2028 aa16.36■□□□□ 0.21
CLSTN3-210ENST00000540931 ARGFXA6NJG6 315 aa16.36■□□□□ 0.21
CLSTN3-210ENST00000540931 MKRN2OSH3BPM6 223 aa16.36■□□□□ 0.21
CLSTN3-210ENST00000540931 SLC22A3O75751 556 aa16.36■□□□□ 0.21
CLSTN3-210ENST00000540931 PLA2G2AP14555 144 aa16.36■□□□□ 0.21
CLSTN3-210ENST00000540931 ADSLP30566 484 aaPredicted RBP16.36■□□□□ 0.21
CLSTN3-210ENST00000540931 DIO3P55073 304 aa16.36■□□□□ 0.21
CLSTN3-210ENST00000540931 GNGT1P63211 74 aa16.36■□□□□ 0.21
CLSTN3-210ENST00000540931 SRSF6Q13247 344 aaKnown RBP16.36■□□□□ 0.21
CLSTN3-210ENST00000540931 PTGR1Q14914 329 aa16.36■□□□□ 0.21
CLSTN3-210ENST00000540931 MAVSQ7Z434 540 aa16.36■□□□□ 0.21
CLSTN3-210ENST00000540931 RIMKLAQ8IXN7 391 aa16.36■□□□□ 0.21
CLSTN3-210ENST00000540931 GALNT16Q8N428 558 aa16.36■□□□□ 0.21
CLSTN3-210ENST00000540931 SLC5A8Q8N695 610 aa16.36■□□□□ 0.21
CLSTN3-210ENST00000540931 OR1N1Q8NGS0 311 aa16.36■□□□□ 0.21
CLSTN3-210ENST00000540931 TM9SF4Q92544 642 aa16.36■□□□□ 0.21
CLSTN3-210ENST00000540931 C8orf44Q96CB5 159 aa16.36■□□□□ 0.21
CLSTN3-210ENST00000540931 CNRIP1Q96F85 164 aaPredicted RBP16.36■□□□□ 0.21
CLSTN3-210ENST00000540931 EGLN2Q96KS0 407 aa16.36■□□□□ 0.21
CLSTN3-210ENST00000540931 ZNF681Q96N22 645 aa16.36■□□□□ 0.21
CLSTN3-210ENST00000540931 ARHGAP9Q9BRR9 750 aa16.36■□□□□ 0.21
CLSTN3-210ENST00000540931 ZNF160Q9HCG1 818 aa16.36■□□□□ 0.21
CLSTN3-210ENST00000540931 NEUROD4Q9HD90 331 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms