RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 ENTPD4Q9Y227 616 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 WDFY4Q6ZS81 3184 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 CCDC88CQ9P219 2028 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 A0A0A6YYC8 382 aaPredicted RBP11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 LY6G6EA0A0G2JKS1 128 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 PATE3B3GLJ2 98 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 I3L1I5 382 aaPredicted RBP11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 TNFRSF10AO00220 468 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 LDB3O75112 727 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 TFPTP0C1Z6 253 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 NELFEP18615 380 aaKnown RBP11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 PRKACGP22612 351 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 PPM1FP49593 454 aaPredicted RBP11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 MAP7Q14244 749 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 TEAD4Q15561 434 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 SYPL1Q16563 259 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 AMZ1Q400G9 498 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 FAM111BQ6SJ93 734 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 USP53Q70EK8 1073 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 CEP68Q76N32 757 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 HMGN2P46Q86SG4 172 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 C1orf210Q8IVY1 113 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 METTL27Q8N6F8 245 aaPredicted RBP11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 ARL10Q8N8L6 244 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 SMYD1Q8NB12 490 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 OR7G2Q8NG99 324 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 MAGEE2Q8TD90 523 aaPredicted RBP11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 ELP4Q96EB1 424 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 CNBD2Q96M20 576 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 BDH2Q9BUT1 245 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 SPRTNQ9H040 489 aaPredicted RBP11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 RUBCNLQ9H714 662 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 IL1RAPQ9NPH3 570 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 RPS6KA6Q9UK32 745 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 TMEM184BQ9Y519 407 aaPredicted RBP11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 U3KQA8 63 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 U3KQV3 271 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 ADAMTS20P59510 1910 aa11.54□□□□□ -0.56
AP003559.1-201ENST00000540906 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 OR2W5A6NFC9 320 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 URADA6NGE7 173 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 H0YJX3 145 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 TGFBR3LH3BV60 316 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 SNAP29O95721 258 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 LYNP07948 512 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 GNAO1P09471 354 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 EPHA8P29322 1005 aaPredicted RBP11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 DCTP40126 519 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 BUD31P41223 144 aaPredicted RBP11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 OR1E2P47887 323 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 RXRGP48443 463 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 XKP51811 444 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 MAT1AQ00266 395 aaKnown RBP11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 RBBP4Q09028 425 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 MED21Q13503 144 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 LASP1Q14847 261 aaKnown RBP11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 SYT16Q17RD7 645 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 ZNF630Q2M218 657 aaPredicted RBP11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 OR52E8Q6IFG1 317 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 KLHL35Q6PF15 583 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 DGAT2L6Q6ZPD8 337 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 TMPRSS9Q7Z410 1059 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 COMTD1Q86VU5 262 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 SDR16C5Q8N3Y7 309 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 MARVELD2Q8N4S9 558 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 RNF31Q96EP0 1072 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 GIMAP5Q96F15 307 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 ZNF285Q96NJ3 590 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 WFDC6Q9BQY6 131 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 ROGDIQ9GZN7 287 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 RAD21L1Q9H4I0 556 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 LYRM4Q9HD34 91 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 A4GALTQ9NPC4 353 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 HCN3Q9P1Z3 774 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 PHF11Q9UIL8 331 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 RAB23Q9ULC3 237 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 TLCD2A6NGC4 264 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 SUV39H1O43463 412 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 CHST10O43529 356 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 CLIC3O95833 236 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 HMGN2P05204 90 aaKnown RBP11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 FABP3P05413 133 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 ATXN8OSP0DMR3 200 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 MATN1P21941 496 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 CD1CP29017 333 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 MLLT3P42568 568 aaPredicted RBP11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 SEPHS1P49903 392 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 MYBPC1Q00872 1141 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 CRB2Q5IJ48 1285 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 PRAMEF17Q5VTA0 474 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 TMEM64Q6YI46 380 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 FKBP9P1Q75LS8 142 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 STK32CQ86UX6 486 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 CARM1Q86X55 608 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 PACRGLQ8N7B6 248 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 GPR32P1Q8NGA4 272 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 ZFP28Q8NHY6 868 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 TFAP2CQ92754 450 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 COL26A1Q96A83 441 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms