RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 OR5T3Q8NGG3 340 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 OR13J1Q8NGT2 312 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 OR4L1Q8NH43 312 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 OR2W6PQ8NHA6 318 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 NEIL3Q8TAT5 605 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 SLC35G2Q8TBE7 412 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 ZCCHC10Q8TBK6 192 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 CHAC2Q8WUX2 184 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 SLC13A3Q8WWT9 602 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 IGFBPL1Q8WX77 278 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 HAUS1Q96CS2 278 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 VMP1Q96GC9 406 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 CCDC138Q96M89 665 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 PRAP1Q96NZ9 151 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 MACROD1Q9BQ69 325 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 SPATA25Q9BR10 227 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 ANP32EQ9BTT0 268 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 C19orf24Q9BVV8 132 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 RBM24Q9BX46 236 aaKnown RBP4.22□□□□□ -1.73
SNHG1-214ENST00000540865 P2RY12Q9H244 342 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 C10orf88Q9H8K7 445 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 LRRC40Q9H9A6 602 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 UBTD1Q9HAC8 227 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 YAE1D1Q9NRH1 226 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 SACM1LQ9NTJ5 587 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 ZNF701Q9NV72 531 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-214ENST00000540865 ANO10Q9NW15 660 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 TRMT1Q9NXH9 659 aaKnown RBP4.22□□□□□ -1.73
SNHG1-214ENST00000540865 QPCTLQ9NXS2 382 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 TUBA8Q9NY65 449 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-214ENST00000540865 ZNF223Q9UK11 482 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-214ENST00000540865 CDC42EP3Q9UKI2 254 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 RUVBL2Q9Y230 463 aaKnown RBP4.22□□□□□ -1.73
SNHG1-214ENST00000540865 TESMINQ9Y4I5 508 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 ATG4BQ9Y4P1 393 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 CHD3Q12873 2000 aaKnown RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 A0A087X1B8 175 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 SYNDIG1LA6NDD5 238 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 MBD3L3A6NE82 208 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 ZNF860A6NHJ4 632 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 A8MUA0 341 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 A8MV72 311 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 DEFB108AA8MXU0 73 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 KDM4EB2RXH2 506 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 GOLGA6L22H0YM25 854 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 PSMD12O00232 456 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 PSMD3O43242 534 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 PSTPIP1O43586 416 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 SPRY1O43609 319 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 PRKNO60260 465 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 TRIM13O60858 407 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 AVILO75366 819 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 SLC16A8O95907 504 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 CATP04040 527 aaKnown RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 P04436 131 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 TNNT1P13805 278 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 ALOX12P18054 663 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 CHRM3P20309 590 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 HOXA5P20719 270 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 MAOAP21397 527 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 RPS3P23396 243 aaKnown RBP eCLIP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 SOX3P41225 446 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 DNASE1L1P49184 302 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 PCYT1AP49585 367 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 TTPAP49638 278 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 SLURP1P55000 103 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 EIF3BP55884 814 aaKnown RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 WNT3P56703 355 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 EEF1A1P68104 462 aaKnown RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 BTG2P78543 158 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 ZBED6P86452 979 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 ACVR1Q04771 509 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 TBL3Q12788 808 aaKnown RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 SEMA3AQ14563 771 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 RPS6KA1Q15418 735 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 ETFDHQ16134 617 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 ZNF750Q32MQ0 723 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 C10orf62Q5T681 223 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 TSTD2Q5T7W7 516 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 THEMIS2Q5TEJ8 643 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 HECTD2Q5U5R9 776 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 EEF1A1P5Q5VTE0 462 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 CAPN13Q6MZZ7 669 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 TRMT10BQ6PF06 316 aaKnown RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 OPN5Q6U736 354 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 RBM43Q6ZSC3 357 aaKnown RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 LHFPL2Q6ZUX7 228 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 PLEKHM3Q6ZWE6 761 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 FKBP9P1Q75LS8 142 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 CCDC50Q8IVM0 306 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 RHOT2Q8IXI1 618 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.21□□□□□ -1.741e-8■■■■■ 36.2
SNHG1-214ENST00000540865 KATNAL2Q8IYT4 538 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 RCOR2Q8IZ40 523 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 LRRC25Q8N386 305 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 RASGEF1CQ8N431 466 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 LIX1Q8N485 282 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 MFSD9Q8NBP5 474 aa4.21□□□□□ -1.74
SNHG1-214ENST00000540865 MBD3L2Q8NHZ7 208 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-214ENST00000540865 ZNF480Q8WV37 535 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms