RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 ABCA4P78363 2273 aa11.47□□□□□ -0.57
COPS7A-211ENST00000540408 LRRC3CA6NJW4 275 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 SAP18O00422 153 aaKnown RBP11.46□□□□□ -0.57
COPS7A-211ENST00000540408 CD22P20273 847 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 ADSLP30566 484 aaPredicted RBP11.46□□□□□ -0.57
COPS7A-211ENST00000540408 OPRM1P35372 400 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 MASP1P48740 699 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 TMED10P49755 219 aaKnown RBP11.46□□□□□ -0.57
COPS7A-211ENST00000540408 HERVK_113P63132 956 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 ERVK-8P63133 956 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 PHEXP78562 749 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 DR1Q01658 176 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 LTBQ06643 244 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 TOMM20Q15388 145 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 NTRK2Q16620 822 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 DEPDC1Q5TB30 811 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 LRRC70Q7Z2Q7 622 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 SLC35F6Q8N357 371 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 PDPRQ8NCN5 879 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 OR7G3Q8NG95 312 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 EXT2Q93063 718 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 YIPF4Q9BSR8 244 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 ERVK-6Q9BXR3 956 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 WWTR1Q9GZV5 400 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 EPB41L4BQ9H329 900 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 WDR41Q9HAD4 459 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 CAMK2AQ9UQM7 478 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 ERVK-19Q9WJR5 959 aa11.46□□□□□ -0.57
COPS7A-211ENST00000540408 MTO1Q9Y2Z2 717 aaKnown RBP11.46□□□□□ -0.57
COPS7A-211ENST00000540408 NAV3Q8IVL0 2385 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 C2orf92A0A1B0GVN3 265 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 EEF1E1-BLOC1S5C9J1V9 151 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 HRKO00198 91 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 PHGDHO43175 533 aaKnown RBP11.45□□□□□ -0.58
COPS7A-211ENST00000540408 EEF1E1O43324 174 aaKnown RBP11.45□□□□□ -0.58
COPS7A-211ENST00000540408 TRIM3O75382 744 aaPredicted RBP11.45□□□□□ -0.58
COPS7A-211ENST00000540408 GPR75O95800 540 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 CD1DP15813 335 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 TCP1P17987 556 aaKnown RBP11.45□□□□□ -0.58
COPS7A-211ENST00000540408 CTSSP25774 331 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 GCKP35557 465 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 ARFIP1P53367 373 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 NRG3P56975 720 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 SORDQ00796 357 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 TNFRSF17Q02223 184 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 CRYZQ08257 329 aaKnown RBP11.45□□□□□ -0.58
COPS7A-211ENST00000540408 RCAN2Q14206 197 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 OR4D1Q15615 310 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 SPRED3Q2MJR0 410 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 NSUN5P2Q63ZY6 315 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 KLHL7Q8IXQ5 586 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 ZBED8Q8IZ13 594 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 ZCCHC7Q8N3Z6 543 aaKnown RBP11.45□□□□□ -0.58
COPS7A-211ENST00000540408 NAXEQ8NCW5 288 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 STAG3L4Q8TBR4 150 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 PYROXD1Q8WU10 500 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 TP53INP1Q96A56 240 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 C18orf12Q96KH6 178 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 TRIB1Q96RU8 372 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 SECISBP2Q96T21 854 aaKnown RBP11.45□□□□□ -0.58
COPS7A-211ENST00000540408 WDR83Q9BRX9 315 aaKnown RBP11.45□□□□□ -0.58
COPS7A-211ENST00000540408 PRDM14Q9GZV8 571 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 OR51B5Q9H339 312 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 CAB39LQ9H9S4 337 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 PROK2Q9HC23 129 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 SNX15Q9NRS6 342 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 LYARQ9NX58 379 aaKnown RBP11.45□□□□□ -0.58
COPS7A-211ENST00000540408 OPTCQ9UBM4 332 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 CNOT11Q9UKZ1 510 aaKnown RBP11.45□□□□□ -0.58
COPS7A-211ENST00000540408 ANGPTL3Q9Y5C1 460 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 IKBKGQ9Y6K9 419 aa11.45□□□□□ -0.58
COPS7A-211ENST00000540408 NIPBLQ6KC79 2804 aaeCLIP11.45□□□□□ -0.58
COPS7A-211ENST00000540408 CD8B2A6NJW9 211 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 FAM171A2A8MVW0 826 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 K7EPI3 171 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 CASKO14936 926 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 CDH16O75309 829 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 SEC31AO94979 1220 aaKnown RBP11.44□□□□□ -0.58
COPS7A-211ENST00000540408 LRATO95237 230 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 ATE1O95260 518 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 ACSL3O95573 720 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 IL18BPO95998 194 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 HPNP05981 417 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 INHBBP09529 407 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 EPB42P16452 691 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 PTX3P26022 381 aaPredicted RBP11.44□□□□□ -0.58
COPS7A-211ENST00000540408 GALNSP34059 522 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 PIK3CBP42338 1070 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 CDK9P50750 372 aaKnown RBP11.44□□□□□ -0.58
COPS7A-211ENST00000540408 ZNF136P52737 540 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 WNT3P56703 355 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 SLC37A1P57057 533 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 PCDH1Q08174 1060 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 DDX39BQ13838 428 aaKnown RBP11.44□□□□□ -0.58
COPS7A-211ENST00000540408 E2F2Q14209 437 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 EBPQ15125 230 aaKnown RBP11.44□□□□□ -0.58
COPS7A-211ENST00000540408 RPS6KA2Q15349 733 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 C6orf163Q5TEZ5 329 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 C18orf63Q68DL7 685 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 VASNQ6EMK4 673 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms