RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 TOXO94900 526 aa9.52□□□□□ -0.88
TRAF1-202ENST00000540010 APODP05090 189 aa9.52□□□□□ -0.88
TRAF1-202ENST00000540010 PCSK2P16519 638 aa9.52□□□□□ -0.88
TRAF1-202ENST00000540010 SHMT2P34897 504 aa9.52□□□□□ -0.88
TRAF1-202ENST00000540010 MMP12P39900 470 aa9.52□□□□□ -0.88
TRAF1-202ENST00000540010 MAGEA8P43361 318 aa9.52□□□□□ -0.88
TRAF1-202ENST00000540010 SMSP52788 366 aa9.52□□□□□ -0.88
TRAF1-202ENST00000540010 ZNF630Q2M218 657 aaPredicted RBP9.52□□□□□ -0.88
TRAF1-202ENST00000540010 UBE2Q1Q7Z7E8 422 aa9.52□□□□□ -0.88
TRAF1-202ENST00000540010 VRK3Q8IV63 474 aa9.52□□□□□ -0.88
TRAF1-202ENST00000540010 FUNDC1Q8IVP5 155 aa9.52□□□□□ -0.88
TRAF1-202ENST00000540010 C1orf216Q8TAB5 229 aa9.52□□□□□ -0.88
TRAF1-202ENST00000540010 PRAP1Q96NZ9 151 aa9.52□□□□□ -0.88
TRAF1-202ENST00000540010 ZNF225Q9UK10 706 aa9.52□□□□□ -0.88
TRAF1-202ENST00000540010 RP1P56715 2156 aa9.52□□□□□ -0.88
TRAF1-202ENST00000540010 ISPDA4D126 451 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 CRHBPP24387 322 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 PGBD2Q6P3X8 592 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 CYHR1Q6ZMK1 362 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 KLHL36Q8N4N3 616 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 OR9Q2Q8NGE9 314 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 MOSPD2Q8NHP6 518 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 ZNF563Q8TA94 476 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 CCM2Q9BSQ5 444 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 OR51E2Q9H255 320 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 UTS2RQ9UKP6 389 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 TMEM98Q9Y2Y6 226 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 J3QLW9 94 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 KAT7O95251 611 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 HLA-DPB1P04440 258 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 ALPPP05187 535 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 ZNF19P17023 458 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 KELP23276 732 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 METAP1P53582 386 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 CTSCP53634 463 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 PNLIPRP1P54315 467 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 SEC13P55735 322 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 SNRPD2P62316 118 aaKnown RBP9.52□□□□□ -0.89
TRAF1-202ENST00000540010 MESP2Q0VG99 397 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 Q6ZPB1 254 aaPredicted RBP9.52□□□□□ -0.89
TRAF1-202ENST00000540010 OAFQ86UD1 273 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 RNF175Q8N4F7 328 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 OR51G2Q8NGK0 314 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 OR2T11Q8NH01 316 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 IL17FQ96PD4 163 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 SLC12A9Q9BXP2 914 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 REEP4Q9H6H4 257 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 RDH14Q9HBH5 336 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 KLHL42Q9P2K6 505 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 CDH7Q9ULB5 785 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 PCDHB11Q9Y5F2 797 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 SLC25A12O75746 678 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 MPC1LP0DKB6 136 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 C6P13671 934 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 ADRB3P13945 408 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 ZNF8P17098 575 aaPredicted RBP9.52□□□□□ -0.89
TRAF1-202ENST00000540010 ACSL1P33121 698 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 MPIP34949 423 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 RNF144AP50876 292 aaPredicted RBP9.52□□□□□ -0.89
TRAF1-202ENST00000540010 KCNC4Q03721 635 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 MAB21L1Q13394 359 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 TAF13Q15543 124 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 PRPF38BQ5VTL8 546 aaKnown RBP9.52□□□□□ -0.89
TRAF1-202ENST00000540010 ADNP2Q6IQ32 1131 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 NAGSQ8N159 534 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 TOMM5Q8N4H5 51 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 COX18Q8N8Q8 333 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 CHDHQ8NE62 594 aaPredicted RBP9.52□□□□□ -0.89
TRAF1-202ENST00000540010 GRHL3Q8TE85 626 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 NKD1Q969G9 470 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 C17orf62Q9BQA9 187 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 HDHD5Q9BXW7 423 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 AKAP7Q9P0M2 348 aaPredicted RBP9.52□□□□□ -0.89
TRAF1-202ENST00000540010 SEC14L4Q9UDX3 406 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 TBC1D24Q9ULP9 559 aa9.52□□□□□ -0.89
TRAF1-202ENST00000540010 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.51□□□□□ -0.89
TRAF1-202ENST00000540010 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.51□□□□□ -0.89
TRAF1-202ENST00000540010 INMT-MINDY4F8WBC2 141 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 EIF3FO00303 357 aaPredicted RBP9.51□□□□□ -0.89
TRAF1-202ENST00000540010 NUAK1O60285 661 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 DNAJB5O75953 348 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 OXSR1O95747 527 aaPredicted RBP9.51□□□□□ -0.89
TRAF1-202ENST00000540010 GSTT2P0CG29 244 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 GSTT2BP0CG30 244 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 SMIM18P0DKX4 95 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 CSNK2A2P19784 350 aaPredicted RBP9.51□□□□□ -0.89
TRAF1-202ENST00000540010 ITGB7P26010 798 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 CNR2P34972 360 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 CD97P48960 835 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 SKP1P63208 163 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 RAB30Q15771 203 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 HENMT1Q5T8I9 393 aaKnown RBP9.51□□□□□ -0.89
TRAF1-202ENST00000540010 ERN2Q76MJ5 926 aaKnown RBP9.51□□□□□ -0.89
TRAF1-202ENST00000540010 PPP1R14AQ96A00 147 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 ARRDC3Q96B67 414 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 S100A13Q99584 98 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 SLC35C2Q9NQQ7 365 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 C5AR2Q9P296 337 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 IL20RAQ9UHF4 553 aa9.51□□□□□ -0.89
TRAF1-202ENST00000540010 MBD1Q9UIS9 605 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms