RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 FLYWCH1Q4VC44 716 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 GPAT3Q53EU6 434 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 C3orf38Q5JPI3 329 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 SPOUT1Q5T280 376 aaKnown RBP9.17□□□□□ -0.94
CDH13-204ENST00000539548 PDZK1Q5T2W1 519 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 DDI2Q5TDH0 399 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 TNFAIP8L2Q6P589 184 aaPredicted RBP9.17□□□□□ -0.94
CDH13-204ENST00000539548 LIPIQ6XZB0 460 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.17□□□□□ -0.94
CDH13-204ENST00000539548 C6orf120Q7Z4R8 191 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 ZNF438Q7Z4V0 828 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 BCDIN3DQ7Z5W3 292 aaKnown RBP9.17□□□□□ -0.94
CDH13-204ENST00000539548 ADIPOR2Q86V24 386 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 RBM45Q8IUH3 476 aaKnown RBP9.17□□□□□ -0.94
CDH13-204ENST00000539548 CFAP206Q8IYR0 622 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 NRSN1Q8IZ57 195 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 LINC00471Q8N535 108 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 ZNF740Q8NDX6 193 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 OR4D11Q8NGI4 311 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 SLC7A13Q8TCU3 470 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 NUP210Q8TEM1 1887 aaPredicted RBP9.17□□□□□ -0.94
CDH13-204ENST00000539548 FGF11Q92914 225 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 SCLYQ96I15 445 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 FRMD6Q96NE9 622 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 ZNF558Q96NG5 402 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 ZNF607Q96SK3 696 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 NELL2Q99435 816 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 SLC46A2Q9BY10 475 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 RNF121Q9H920 327 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 ISYNA1Q9NPH2 558 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 MRPS18AQ9NVS2 196 aaKnown RBP9.17□□□□□ -0.94
CDH13-204ENST00000539548 FAM25AB3EWG3 89 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 FAM25CB3EWG5 89 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 FAM25GB3EWG6 89 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 HMGN4O00479 90 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 NRG2O14511 850 aaPredicted RBP9.16□□□□□ -0.94
CDH13-204ENST00000539548 PLA2G10O15496 165 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 PI15O43692 258 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 TMCC2O75069 709 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 ALX3O95076 343 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 ACADMP11310 421 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 TNNI3P19429 210 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 XPAP23025 273 aaPredicted RBP9.16□□□□□ -0.94
CDH13-204ENST00000539548 MLLT3P42568 568 aaPredicted RBP9.16□□□□□ -0.94
CDH13-204ENST00000539548 GIPRP48546 466 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 MANFP55145 182 aaKnown RBP9.16□□□□□ -0.94
CDH13-204ENST00000539548 CNTN1Q12860 1018 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 TPBGQ13641 420 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 GINS1Q14691 196 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 SYT14P1Q58G82 188 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 YIF1BQ5BJH7 314 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 ZNF628Q5EBL2 1059 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 KIAA1211LQ6NV74 962 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 TMIGD1Q6UXZ0 262 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 DEF8Q6ZN54 512 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 LAPTM4BQ86VI4 370 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 LIX1LQ8IVB5 337 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 CACTIN-AS1Q8N1I8 211 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 LMNTD1Q8N9Z9 388 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 HCAR2Q8TDS4 363 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 RAB8BQ92930 207 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 TM4SF18Q96CE8 201 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 RIPOR3Q96MK2 946 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 KCTD7Q96MP8 289 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 ZNF582Q96NG8 517 aaPredicted RBP9.16□□□□□ -0.94
CDH13-204ENST00000539548 TTYH2Q9BSA4 534 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 SORBS1Q9BX66 1292 aaKnown RBP9.16□□□□□ -0.94
CDH13-204ENST00000539548 RANGRFQ9HD47 186 aaPredicted RBP9.16□□□□□ -0.94
CDH13-204ENST00000539548 FGF20Q9NP95 211 aaPredicted RBP9.16□□□□□ -0.94
CDH13-204ENST00000539548 SLAMF7Q9NQ25 335 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 SEMA3GQ9NS98 782 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 ZSCAN32Q9NX65 697 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 PAQR5Q9NXK6 330 aaPredicted RBP9.16□□□□□ -0.94
CDH13-204ENST00000539548 DKK3Q9UBP4 350 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 SRRDQ9UH36 339 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 NUFIP1Q9UHK0 495 aaKnown RBP9.16□□□□□ -0.94
CDH13-204ENST00000539548 A4GNTQ9UNA3 340 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 BOLA1Q9Y3E2 137 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 KIAA1549LQ6ZVL6 1849 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 A0A1W2PRQ8 180 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 A0A1W2PRU2 124 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 IRGMA1A4Y4 181 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 TEX28O15482 410 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 PDPK1O15530 556 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 B4GALT2O60909 372 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 LILRB5O75023 590 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 TSPAN19P0C672 248 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 GJA1P17302 382 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 MMP12P39900 470 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 FRKP42685 505 aaPredicted RBP9.16□□□□□ -0.94
CDH13-204ENST00000539548 KIR2DL3P43628 341 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 GAS1P54826 345 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 WNT4P56705 351 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 PCBP4P57723 403 aaKnown RBP9.16□□□□□ -0.94
CDH13-204ENST00000539548 DAB2P98082 770 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 CDK5Q00535 292 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 CHRNEQ04844 493 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 DMPKQ09013 629 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.16□□□□□ -0.94
CDH13-204ENST00000539548 ZNF805Q5CZA5 627 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms