RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 NEIL3Q8TAT5 605 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.89□□□□□ -0.19
CACNB1-206ENST00000539338 MAGIXQ9H6Y5 334 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 TRPV4Q9HBA0 871 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 EXTL2Q9UBQ6 330 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 GRHPRQ9UBQ7 328 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 HCN2Q9UL51 889 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 OR2AT4A6NND4 320 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 E7EQ34 232 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 PPP6CO00743 305 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 SEMA4FO95754 770 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 HTR1AP08908 422 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 HSD11B1P28845 292 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 DEFB134Q4QY38 66 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 C22orf42Q6IC83 251 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 TMED4Q7Z7H5 227 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 PAQR7Q86WK9 346 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 OR8D2Q9GZM6 311 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 HRASLS2Q9NWW9 162 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 SCGNO76038 276 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 HBQ1P09105 142 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 STOMP27105 288 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 PER3P56645 1201 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 NCS1P62166 190 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 POU6F2P78424 691 aaPredicted RBP13.88□□□□□ -0.19
CACNB1-206ENST00000539338 MRPS21P82921 87 aaKnown RBP13.88□□□□□ -0.19
CACNB1-206ENST00000539338 NXPE4Q6UWF7 544 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 CHST14Q8NCH0 376 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 CCDC107Q8WV48 283 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 DNAJA3Q96EY1 480 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 SECISBP2Q96T21 854 aaKnown RBP13.88□□□□□ -0.19
CACNB1-206ENST00000539338 SMURF1Q9HCE7 757 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 ZFR2Q9UPR6 939 aaKnown RBP13.88□□□□□ -0.19
CACNB1-206ENST00000539338 LINC01553A4QN01 128 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 RFPL2O75678 378 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 PRH1P02810 166 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 EPCAMP16422 314 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 ATF4P18848 351 aaPredicted RBP13.88□□□□□ -0.19
CACNB1-206ENST00000539338 SHMT2P34897 504 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 GABRA3P34903 492 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 MAGEA6P43360 314 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 SOX2P48431 317 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 VSX2P58304 361 aaPredicted RBP13.88□□□□□ -0.19
CACNB1-206ENST00000539338 FAM174AQ8TBP5 190 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 GATAD2BQ8WXI9 593 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 NR4A3Q92570 626 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 ZNF689Q96CS4 500 aaPredicted RBP13.88□□□□□ -0.19
CACNB1-206ENST00000539338 SLC6A15Q9H2J7 730 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 SERINC1Q9NRX5 453 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 NPIPA5E9PKD4 350 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 TGM5O43548 720 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 TBRG1Q3YBR2 411 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 TRNP1Q6NT89 227 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 ZNF431Q8TF32 576 aaPredicted RBP13.88□□□□□ -0.19
CACNB1-206ENST00000539338 LHPPQ9H008 270 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 LDAHQ9H6V9 325 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 NPIPA1Q9UND3 350 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 TMEM5Q9Y2B1 443 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 NUP98P52948 1817 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 ANHXE9PGG2 379 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 MAN2A2P49641 1150 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 NNATQ16517 81 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 CTC1Q2NKJ3 1217 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 ARHGAP40Q5TG30 622 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 FNDC8Q8TC99 324 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 GATBO75879 557 aaKnown RBP13.88□□□□□ -0.19
CACNB1-206ENST00000539338 RHCEP18577 417 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 KCNJ5P48544 419 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 CMPK2Q5EBM0 449 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 CLLU1OSQ5K130 101 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 PDSS1Q5T2R2 415 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 ALG1LQ6GMV1 187 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 PIANPQ8IYJ0 282 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 ZFP41Q8N8Y5 198 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 MOAP1Q96BY2 351 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 ZBED3Q96IU2 234 aaPredicted RBP13.88□□□□□ -0.19
CACNB1-206ENST00000539338 BIRC8Q96P09 236 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 DPH7Q9BTV6 452 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 TBCCD1Q9NVR7 557 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 KLRF1Q9NZS2 232 aa13.88□□□□□ -0.19
CACNB1-206ENST00000539338 FLRT2O43155 660 aa13.87□□□□□ -0.19
CACNB1-206ENST00000539338 IFNA7P01567 189 aa13.87□□□□□ -0.19
CACNB1-206ENST00000539338 KCNC1P48547 511 aa13.87□□□□□ -0.19
CACNB1-206ENST00000539338 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.87□□□□□ -0.19
CACNB1-206ENST00000539338 MLIPQ5VWP3 458 aa13.87□□□□□ -0.19
CACNB1-206ENST00000539338 TMPRSS9Q7Z410 1059 aa13.87□□□□□ -0.19
CACNB1-206ENST00000539338 TMEM25Q86YD3 366 aa13.87□□□□□ -0.19
CACNB1-206ENST00000539338 MDGA1Q8NFP4 955 aa13.87□□□□□ -0.19
CACNB1-206ENST00000539338 OR2T33Q8NG76 320 aa13.87□□□□□ -0.19
CACNB1-206ENST00000539338 ACTL8Q9H568 366 aa13.87□□□□□ -0.19
CACNB1-206ENST00000539338 COLQQ9Y215 455 aaPredicted RBP13.87□□□□□ -0.19
CACNB1-206ENST00000539338 IGLON5A6NGN9 336 aa13.87□□□□□ -0.19
CACNB1-206ENST00000539338 DNAJB5O75953 348 aa13.87□□□□□ -0.19
CACNB1-206ENST00000539338 SLC16A8O95907 504 aa13.87□□□□□ -0.19
CACNB1-206ENST00000539338 VAMP1P23763 118 aa13.87□□□□□ -0.19
CACNB1-206ENST00000539338 GSTM2P28161 218 aa13.87□□□□□ -0.19
CACNB1-206ENST00000539338 TAS2R43P59537 309 aa13.87□□□□□ -0.19
CACNB1-206ENST00000539338 NFATC3Q12968 1075 aa13.87□□□□□ -0.19
CACNB1-206ENST00000539338 NR0B2Q15466 257 aa13.87□□□□□ -0.19
CACNB1-206ENST00000539338 SPHARQ15513 63 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms