RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 A0A087X002 238 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 A0A0U1RRA0 63 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 A0A1W2PPR1 153 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 SNURFLB1AK76 121 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 E5RGE8 158 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 EEF2KO00418 725 aaKnown RBP0.9□□□□□ -2.26
HIF1A-204ENST00000539097 MAPK13O15264 365 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 INPP4BO15327 924 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 CACNG3O60359 315 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 OR6A2O95222 327 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 ADCY5O95622 1261 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 CLDN1O95832 211 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 IFNB1P01574 187 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 ABHD2P08910 425 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 CCDC192P0DO97 292 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 POU2F1P14859 743 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 FERP16591 822 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 GAP43P17677 238 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 AK4P27144 223 aaPredicted RBP0.9□□□□□ -2.26
HIF1A-204ENST00000539097 FCGR2BP31994 310 aaPredicted RBP0.9□□□□□ -2.26
HIF1A-204ENST00000539097 KIF5BP33176 963 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 CSTF2P33240 577 aaKnown RBP eCLIP0.9□□□□□ -2.26
HIF1A-204ENST00000539097 HSPA1LP34931 641 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 SFTPDP35247 375 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 CAMLGP49069 296 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 NT5C2P49902 561 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 COX10Q12887 443 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 PLA2G7Q13093 441 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 GPR17Q13304 367 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 NONOQ15233 471 aaKnown RBP eCLIP0.9□□□□□ -2.26
HIF1A-204ENST00000539097 STX1AQ16623 288 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 UPP1Q16831 310 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 TPD52L1Q16890 204 aaPredicted RBP0.9□□□□□ -2.26
HIF1A-204ENST00000539097 WDR38Q5JTN6 314 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 CASC10Q5T4H9 136 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 AWAT2Q6E213 333 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 WDR88Q6ZMY6 472 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 FRRS1Q6ZNA5 592 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 ARMCX2Q7L311 632 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 FCRLAQ7L513 359 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 PRSS48Q7RTY5 328 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 YRDCQ86U90 279 aaKnown RBP0.9□□□□□ -2.26
HIF1A-204ENST00000539097 LRRC49Q8IUZ0 686 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 LAX1Q8IWV1 398 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 OR4N5Q8IXE1 308 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 KLHL7Q8IXQ5 586 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 SLC22A15Q8IZD6 547 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 BCORP1Q8N888 145 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 OR56B1Q8NGI3 324 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 LRRC15Q8TF66 581 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 SLC13A3Q8WWT9 602 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 PIK3R3Q92569 461 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 EMG1Q92979 244 aaKnown RBP0.9□□□□□ -2.26
HIF1A-204ENST00000539097 MYLPFQ96A32 169 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 ZBTB9Q96C00 473 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 MTBPQ96DY7 904 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 C10orf90Q96M02 699 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 LINC00479Q96M42 142 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 RUNDC3BQ96NL0 473 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 USP28Q96RU2 1077 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 PRMT1Q99873 361 aaKnown RBP0.9□□□□□ -2.26
HIF1A-204ENST00000539097 SH3GL3Q99963 347 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 CBWD1Q9BRT8 395 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 SLC5A7Q9GZV3 580 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 OPN3Q9H1Y3 402 aaPredicted RBP0.9□□□□□ -2.26
HIF1A-204ENST00000539097 NEUROG2Q9H2A3 272 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 RNPEPL1Q9HAU8 725 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 EXOSC3Q9NQT5 275 aaKnown RBP0.9□□□□□ -2.26
HIF1A-204ENST00000539097 ZFP57Q9NU63 452 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 RNF186Q9NXI6 227 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 BCAP29Q9UHQ4 241 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 MYO6Q9UM54 1294 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 ZNF510Q9Y2H8 683 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 NSG2Q9Y328 171 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 PYGO1Q9Y3Y4 419 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 KIF7Q2M1P5 1343 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 PREX1Q8TCU6 1659 aa0.9□□□□□ -2.26
HIF1A-204ENST00000539097 ANTXRLA6NF34 631 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 C17orf105B2RV13 164 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 PRAC2D3DTV9 90 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 K7EQD1 137 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 SLC17A2O00624 439 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 CASC3O15234 703 aaKnown RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 REC8O95072 547 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 CEACAM1P13688 526 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 POLR2CP19387 275 aaPredicted RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 PCMT1P22061 227 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 AHCYP23526 432 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 PBLDP30039 288 aaPredicted RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 HPDP32754 393 aaPredicted RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 RPL4P36578 427 aaKnown RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 GRIA1P42261 906 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 CLDN17P56750 224 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 UBE2HP62256 183 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 SPAG1Q07617 926 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 LGALS3BPQ08380 585 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 RBM39Q14498 530 aaKnown RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 MTF1Q14872 753 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 P2RY6Q15077 328 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 KRTAP24-1Q3LI83 254 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms