RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 R3HCC1LQ7Z5L2 792 aaKnown RBP16.19■□□□□ 0.18
CLN6-202ENST00000538696 ENDOVQ8N8Q3 282 aaKnown RBP16.19■□□□□ 0.18
CLN6-202ENST00000538696 STT3BQ8TCJ2 826 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 UCN3Q969E3 161 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 TBC1D20Q96BZ9 403 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 OR1F2PQ96R84 312 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 SPSB2Q99619 263 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 TGIF2Q9GZN2 237 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 NANOGQ9H9S0 305 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 SLC6A13Q9NSD5 602 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 C14orf105Q9NVL8 296 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 SLC25A37Q9NYZ2 338 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 DKK4Q9UBT3 224 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.19■□□□□ 0.18
CLN6-202ENST00000538696 WBP11Q9Y2W2 641 aaKnown RBP16.19■□□□□ 0.18
CLN6-202ENST00000538696 SPACA6W5XKT8 324 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 NCOR2Q9Y618 2525 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 C15orf38-AP3S2A0A0A6YYH1 394 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 ERN1O75460 977 aaKnown RBP16.18■□□□□ 0.18
CLN6-202ENST00000538696 CPSF4O95639 269 aaKnown RBP16.18■□□□□ 0.18
CLN6-202ENST00000538696 GSNP06396 782 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 FHP07954 510 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 RAB40ALP0C0E4 278 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 ZGLP1P0C6A0 271 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 NR2F6P10588 404 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 TCN1P20061 433 aaPredicted RBP16.18■□□□□ 0.18
CLN6-202ENST00000538696 IL10P22301 178 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 F8A1P23610 371 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 PTPN6P29350 595 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 DLSTP36957 453 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 GSTM5P46439 218 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 ERFP50548 548 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 MTPNP58546 118 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 ACTR3P61158 418 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 OCA2Q04671 838 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 CLN3Q13286 438 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 MPEG1Q2M385 716 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 NDUFAF5Q5TEU4 345 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 SHISA6Q6ZSJ9 500 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 ARPINQ7Z6K5 226 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 TICAM1Q8IUC6 712 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 PRSS58Q8IYP2 241 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 SNIP1Q8TAD8 396 aaKnown RBP16.18■□□□□ 0.18
CLN6-202ENST00000538696 FGF11Q92914 225 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 CIDECQ96AQ7 238 aaPredicted RBP16.18■□□□□ 0.18
CLN6-202ENST00000538696 MTERF3Q96E29 417 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 CCDC115Q96NT0 180 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 PRPF18Q99633 342 aaKnown RBP16.18■□□□□ 0.18
CLN6-202ENST00000538696 CPPED1Q9BRF8 314 aaPredicted RBP16.18■□□□□ 0.18
CLN6-202ENST00000538696 BHLHE41Q9C0J9 482 aaPredicted RBP16.18■□□□□ 0.18
CLN6-202ENST00000538696 SOX17Q9H6I2 414 aaPredicted RBP16.18■□□□□ 0.18
CLN6-202ENST00000538696 WDR54Q9H977 334 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 MS4A12Q9NXJ0 267 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 SUCOQ9UBS9 1254 aaKnown RBP16.18■□□□□ 0.18
CLN6-202ENST00000538696 BTNL2Q9UIR0 455 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 L3MBTL1Q9Y468 752 aa16.18■□□□□ 0.18
CLN6-202ENST00000538696 C21orf140B9A014 251 aa16.17■□□□□ 0.18
CLN6-202ENST00000538696 TBX19O60806 448 aa16.17■□□□□ 0.18
CLN6-202ENST00000538696 B4GALT2O60909 372 aa16.17■□□□□ 0.18
CLN6-202ENST00000538696 GUCY1B2O75343 617 aa16.17■□□□□ 0.18
CLN6-202ENST00000538696 CDC123O75794 336 aaPredicted RBP16.17■□□□□ 0.18
CLN6-202ENST00000538696 ATP6V1G2O95670 118 aa16.17■□□□□ 0.18
CLN6-202ENST00000538696 DDCP20711 480 aa16.17■□□□□ 0.18
CLN6-202ENST00000538696 BUD31P41223 144 aaPredicted RBP16.17■□□□□ 0.18
CLN6-202ENST00000538696 ALDH9A1P49189 494 aa16.17■□□□□ 0.18
CLN6-202ENST00000538696 EEFSECP57772 596 aaKnown RBP16.17■□□□□ 0.18
CLN6-202ENST00000538696 RPS18P62269 152 aaKnown RBP16.17■□□□□ 0.18
CLN6-202ENST00000538696 MS4A2Q01362 244 aa16.17■□□□□ 0.18
CLN6-202ENST00000538696 RIPK1Q13546 671 aa16.17■□□□□ 0.18
CLN6-202ENST00000538696 CCNIQ14094 377 aa16.17■□□□□ 0.18
CLN6-202ENST00000538696 RUNDC3AQ59EK9 446 aa16.17■□□□□ 0.18
CLN6-202ENST00000538696 ANXA8L1Q5VT79 327 aa16.17■□□□□ 0.18
CLN6-202ENST00000538696 FAM69BQ5VUD6 431 aa16.17■□□□□ 0.18
CLN6-202ENST00000538696 MED25Q71SY5 747 aa16.17■□□□□ 0.18
CLN6-202ENST00000538696 IL22RA1Q8N6P7 574 aa16.17■□□□□ 0.18
CLN6-202ENST00000538696 ANKRD27Q96NW4 1050 aa16.17■□□□□ 0.18
CLN6-202ENST00000538696 FAIM2Q9BWQ8 316 aa16.17■□□□□ 0.18
CLN6-202ENST00000538696 IKZF5Q9H5V7 419 aa16.17■□□□□ 0.18
CLN6-202ENST00000538696 CCDC86Q9H6F5 360 aaKnown RBP16.17■□□□□ 0.18
CLN6-202ENST00000538696 MIEF1Q9NQG6 463 aa16.17■□□□□ 0.18
CLN6-202ENST00000538696 NXT1Q9UKK6 140 aaKnown RBP16.17■□□□□ 0.18
CLN6-202ENST00000538696 PRSS51A0A1B0GVH4 220 aa16.16■□□□□ 0.18
CLN6-202ENST00000538696 OR2W5A6NFC9 320 aa16.16■□□□□ 0.18
CLN6-202ENST00000538696 GLOD5A6NK44 160 aa16.16■□□□□ 0.18
CLN6-202ENST00000538696 RFXANKO14593 260 aa16.16■□□□□ 0.18
CLN6-202ENST00000538696 KLF7O75840 302 aaPredicted RBP16.16■□□□□ 0.18
CLN6-202ENST00000538696 CAPNS1P04632 268 aa16.16■□□□□ 0.18
CLN6-202ENST00000538696 TRPC1P48995 793 aa16.16■□□□□ 0.18
CLN6-202ENST00000538696 GSK3BP49841 420 aa16.16■□□□□ 0.18
CLN6-202ENST00000538696 RHAGQ02094 409 aa16.16■□□□□ 0.18
CLN6-202ENST00000538696 LIPEQ05469 1076 aa16.16■□□□□ 0.18
CLN6-202ENST00000538696 SRSF6Q13247 344 aaKnown RBP16.16■□□□□ 0.18
CLN6-202ENST00000538696 MINDY4Q4G0A6 757 aa16.16■□□□□ 0.18
CLN6-202ENST00000538696 VASH2Q86V25 355 aa16.16■□□□□ 0.18
CLN6-202ENST00000538696 LAPTM4BQ86VI4 370 aa16.16■□□□□ 0.18
CLN6-202ENST00000538696 OR8J3Q8NGG0 315 aa16.16■□□□□ 0.18
CLN6-202ENST00000538696 DNAJB8Q8NHS0 232 aa16.16■□□□□ 0.18
CLN6-202ENST00000538696 AURKBQ96GD4 344 aaPredicted RBP16.16■□□□□ 0.18
CLN6-202ENST00000538696 NAF1Q96HR8 494 aaKnown RBP16.16■□□□□ 0.18
CLN6-202ENST00000538696 RPF2Q9H7B2 306 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms