RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 GAL3ST3Q96A11 431 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 TM4SF19Q96DZ7 209 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 NEUROD4Q9HD90 331 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 KCMF1Q9P0J7 381 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 OR5K3A6NET4 321 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 CSF2P04141 144 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 DRD2P14416 443 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 MATN1P21941 496 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 NTSP30990 170 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 PCBP3P57721 371 aaKnown RBP13.31□□□□□ -0.28
ACTN1-205ENST00000538545 FUT5Q11128 374 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 APOFQ13790 326 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 CTU2Q2VPK5 515 aaKnown RBP13.31□□□□□ -0.28
ACTN1-205ENST00000538545 USP51Q70EK9 711 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 ATG16L2Q8NAA4 619 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 OR9Q2Q8NGE9 314 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 SLC35G5Q96KT7 338 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 COL21A1Q96P44 957 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 RBM4BQ9BQ04 359 aaKnown RBP13.31□□□□□ -0.28
ACTN1-205ENST00000538545 RBM4Q9BWF3 364 aaKnown RBP13.31□□□□□ -0.28
ACTN1-205ENST00000538545 REEP1Q9H902 201 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 ENTPD4Q9Y227 616 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 MRPS17Q9Y2R5 130 aaKnown RBP13.31□□□□□ -0.28
ACTN1-205ENST00000538545 NAALAD2Q9Y3Q0 740 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 ASCC3Q8N3C0 2202 aaKnown RBP13.31□□□□□ -0.28
ACTN1-205ENST00000538545 KIR2DS5A0A0G2JLQ3 304 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 A0A0G2JNG1 304 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 CCDC160A6NGH7 325 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 C5orf58C9J3I9 102 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 KIR2DS3K7RE56 304 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 TNFSF14O43557 240 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 TPST2O60704 377 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 NR2F6P10588 404 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 IGFBP5P24593 272 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 ALDH4A1P30038 563 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 SHC2P98077 582 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 SPIBQ01892 262 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 BNIP3Q12983 259 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 BIRC2Q13490 618 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 KIR2DS5Q14953 304 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 REEP3Q6NUK4 255 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 SHQ1Q6PI26 577 aaKnown RBP13.31□□□□□ -0.28
ACTN1-205ENST00000538545 NLGN4XQ8N0W4 816 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 CNIH3Q8TBE1 160 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 C10orf90Q96M02 699 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 ZNF681Q96N22 645 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 ADNPQ9H2P0 1102 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 CAPN10Q9HC96 672 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 WNT16Q9UBV4 365 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 TMEM131Q92545 1883 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 A0A0J9YY10 115 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 TPD52P55327 224 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-205ENST00000538545 RAPSNQ13702 412 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 ERV3-1Q14264 604 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 ZNF630Q2M218 657 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-205ENST00000538545 PATL1Q86TB9 770 aaKnown RBP13.3□□□□□ -0.28
ACTN1-205ENST00000538545 OOSP2Q86WS3 158 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 PJA1Q8NG27 643 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 OR9A4Q8NGU2 314 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 RERGQ96A58 199 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-205ENST00000538545 TREX2Q9BQ50 279 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-205ENST00000538545 RHNO1Q9BSD3 238 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 CD320Q9NPF0 282 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 TAS2R7Q9NYW3 318 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 GMEB1Q9Y692 573 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 PCDH17O14917 1159 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 FRS3O43559 492 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 RDH16O75452 317 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 BLKP51451 505 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 XKP51811 444 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 ITGA1P56199 1179 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 LSM11P83369 360 aaKnown RBP eCLIP13.3□□□□□ -0.28
ACTN1-205ENST00000538545 SYT16Q17RD7 645 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 IFI44LQ53G44 452 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 LAIR1Q6GTX8 287 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 RBM44Q6ZP01 1051 aaKnown RBP13.3□□□□□ -0.28
ACTN1-205ENST00000538545 SVOPLQ8N434 492 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 CSNK1A1LQ8N752 337 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 OR7G2Q8NG99 324 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 TBC1D20Q96BZ9 403 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 ING2Q9H160 280 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 CLK4Q9HAZ1 481 aaKnown RBP13.3□□□□□ -0.28
ACTN1-205ENST00000538545 ACSS1Q9NUB1 689 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-205ENST00000538545 DAPP1Q9UN19 280 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 ANGPT4Q9Y264 503 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 LYVE1Q9Y5Y7 322 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 BDP1A6H8Y1 2624 aa13.3□□□□□ -0.28
ACTN1-205ENST00000538545 LOC100130705A0A1B0GUX0 176 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 M0R129 80 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 M0R3H8 397 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 TBX19O60806 448 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 UBXN7O94888 489 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 NTN1O95631 604 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 CHRM4P08173 479 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 NR2F1P10589 423 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 NME1P15531 152 aaKnown RBP13.29□□□□□ -0.28
ACTN1-205ENST00000538545 ALOX12P18054 663 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 CSNK2A2P19784 350 aaPredicted RBP13.29□□□□□ -0.28
ACTN1-205ENST00000538545 DNAJA1P31689 397 aaKnown RBP13.29□□□□□ -0.28
ACTN1-205ENST00000538545 SOX18P35713 384 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms