RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 TGFB1P01137 390 aa12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 PCNAP12004 261 aa12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 CTSSP25774 331 aa12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 MASP1P48740 699 aa12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 FNTAP49354 379 aa12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 FBXW4P57775 412 aa12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 CHIT1Q13231 466 aa12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 ZNF267Q14586 743 aaPredicted RBP12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 NTRK2Q16620 822 aa12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 HIST2H2ACQ16777 129 aaPredicted RBP12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 PAGE2BQ5JRK9 111 aa12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 SHEQ5VZ18 495 aa12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 C18orf63Q68DL7 685 aa12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 HIST2H2AA3Q6FI13 130 aa12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 RNF111Q6ZNA4 994 aa12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 LUZP2Q86TE4 346 aa12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 CXorf67Q86X51 503 aaPredicted RBP12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 PDIK1LQ8N165 341 aa12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 CIARTQ8N365 385 aaPredicted RBP12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 BBOF1Q8ND07 529 aa12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 LRRN4CLQ8ND94 238 aa12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 WDR34Q96EX3 536 aa12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 VPS39Q96JC1 886 aa12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 PBKQ96KB5 322 aa12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 RILPQ96NA2 401 aa12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 NAP1L3Q99457 506 aaPredicted RBP12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 RPF2Q9H7B2 306 aaKnown RBP12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.82□□□□□ -0.36
SMARCA4-206ENST00000538456 HIVEP2P31629 2446 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 GOLGA6L10A0A0M3HER8 536 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 MBD3L4A6NDZ8 208 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 MBD3L3A6NE82 208 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 MBD3L5A6NJ08 208 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 CD8B2A6NJW9 211 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 FAM171A2A8MVW0 826 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 H7C1Q1 480 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 SMAD7O15105 426 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 OR10H2O60403 315 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 CCNT2O60583 730 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 ERN1O75460 977 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 STK16O75716 305 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 SCELO95171 688 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 TMIGD3P0DMS9 266 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 ALOX15P16050 662 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 OPRM1P35372 400 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 RPL21P46778 160 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 CPA2P48052 419 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 CDK9P50750 372 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 IRF8Q02556 426 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 SLAMF1Q13291 335 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 LAPTM5Q13571 262 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 EBPQ15125 230 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 RPS6KA2Q15349 733 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 SF3B4Q15427 424 aaKnown RBP eCLIP12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 TMEM35AQ53FP2 167 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 EIPR1Q53HC9 387 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 STEAP4Q687X5 459 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 VASNQ6EMK4 673 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 GPSM1Q86YR5 675 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 ANKMY2Q8IV38 441 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 P3H2Q8IVL5 708 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 TCAIMQ8N3R3 496 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 C9orf106Q8NAJ2 232 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 MBD3L2Q8NHZ7 208 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 ZNF473Q8WTR7 871 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 EXT2Q93063 718 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 COX4I2Q96KJ9 171 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 GNRHR2Q96P88 292 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 REPIN1Q9BWE0 567 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 RBM24Q9BX46 236 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 UGT2B28Q9BY64 529 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 CAB39LQ9H9S4 337 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 TEX10Q9NXF1 929 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 GALNT8Q9NY28 637 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 CD274Q9NZQ7 290 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 JKAMPQ9P055 326 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 C15orf41Q9Y2V0 281 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 COL6A5A8TX70 2615 aa12.81□□□□□ -0.36
SMARCA4-206ENST00000538456 SH3D21A4FU49 640 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 GLOD5A6NK44 160 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 TP53I11O14683 189 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 ARHGEF9O43307 516 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 PIAS1O75925 651 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 GOSR1O95249 250 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 HPNP05981 417 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 BMP7P18075 431 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 EPORP19235 508 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 GGT5P36269 586 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 RAP1GDS1P52306 607 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 SLC12A2P55011 1212 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 SLC37A1P57057 533 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 TNFRSF17Q02223 184 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 MGAT5Q09328 741 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 FOXF2Q12947 444 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 DDX39BQ13838 428 aaKnown RBP12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 RCAN2Q14206 197 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 OR4D1Q15615 310 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 WIPI1Q5MNZ9 446 aaPredicted RBP12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 TBCELQ5QJ74 424 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 FNDC7Q5VTL7 733 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms