RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 TNFRSF4P43489 277 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 KIR2DL1P43626 348 aaPredicted RBP8.75□□□□□ -1.01
DDB1-211ENST00000538280 STARD6P59095 220 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 ABATP80404 500 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 ZNF846Q147U1 533 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 DUSP7Q16829 419 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 TOR1AIP1Q5JTV8 583 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 TMEM201Q5SNT2 666 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 OR4C11Q6IEV9 310 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 ZNF793Q6ZN11 406 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 FAM92BQ6ZTR7 304 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 SLC46A3Q7Z3Q1 461 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 P3H2Q8IVL5 708 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 MFSD4AQ8N468 514 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 AMER3Q8N944 861 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 OR9Q2Q8NGE9 314 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 NDNFQ8TB73 568 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 SFXN5Q8TD22 340 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 CHPT1Q8WUD6 406 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 SLC38A5Q8WUX1 472 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 RASSF5Q8WWW0 418 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 ASB12Q8WXK4 309 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 MYDGFQ969H8 173 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 ELSPBP1Q96BH3 223 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 ZBED6CLQ96FA7 236 aaPredicted RBP8.75□□□□□ -1.01
DDB1-211ENST00000538280 C12orf66Q96MD2 445 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 PRAP1Q96NZ9 151 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 FERD3LQ96RJ6 166 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 KXD1Q9BQD3 176 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 COPS4Q9BT78 406 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 ITPAQ9BY32 194 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 WDR12Q9GZL7 423 aaKnown RBP8.75□□□□□ -1.01
DDB1-211ENST00000538280 MVB12BQ9H7P6 319 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 NMNAT1Q9HAN9 279 aaPredicted RBP8.75□□□□□ -1.01
DDB1-211ENST00000538280 ANKHQ9HCJ1 492 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 PRM3Q9NNZ6 103 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 PARD6AQ9NPB6 346 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 ZDHHC4Q9NPG8 344 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 RASSF1Q9NS23 344 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 REV1Q9UBZ9 1251 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 ERGIC3Q9Y282 383 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 GPC6Q9Y625 555 aaPredicted RBP8.75□□□□□ -1.01
DDB1-211ENST00000538280 CFAP20Q9Y6A4 193 aaKnown RBP8.75□□□□□ -1.01
DDB1-211ENST00000538280 PMF1-BGLAPU3KQ54 211 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 USP24Q9UPU5 2620 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 A0A1W2PP55 124 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 PRAMEF27A3QJZ7 478 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 SH3D21A4FU49 640 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 LRIT2A6NDA9 550 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 C4orf51C9J302 202 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 C5orf58C9J3I9 102 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 CLDN25C9JDP6 229 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 OR1F1O43749 312 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 MAN1A2O60476 641 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 MPZL2O60487 215 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 SEMA7AO75326 666 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 PCDH8O95206 1070 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 BCHEP06276 602 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 HOXC4P09017 264 aaPredicted RBP8.74□□□□□ -1.01
DDB1-211ENST00000538280 PIPP12273 146 aaPredicted RBP8.74□□□□□ -1.01
DDB1-211ENST00000538280 ACP5P13686 325 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 TGM1P22735 817 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 NR4A1P22736 598 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 CHMP24386 653 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 ELAVL4P26378 380 aaKnown RBP8.74□□□□□ -1.01
DDB1-211ENST00000538280 PEBP1P30086 187 aaKnown RBP8.74□□□□□ -1.01
DDB1-211ENST00000538280 IDUAP35475 653 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 AHRP35869 848 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 BCL6P41182 706 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 SLC15A1P46059 708 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 CRISP1P54107 249 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 MANFP55145 182 aaKnown RBP8.74□□□□□ -1.01
DDB1-211ENST00000538280 RPS21P63220 83 aaKnown RBP8.74□□□□□ -1.01
DDB1-211ENST00000538280 CEBPEQ15744 281 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 DGUOKQ16854 277 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 ITPRIPL2Q3MIP1 535 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 RPS26P11Q5JNZ5 115 aaPredicted RBP8.74□□□□□ -1.01
DDB1-211ENST00000538280 COLEC12Q5KU26 742 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 SLX4IPQ5VYV7 408 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 C12orf73Q69YU5 71 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 ZNF425Q6IV72 752 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 TNFAIP8L2Q6P589 184 aaPredicted RBP8.74□□□□□ -1.01
DDB1-211ENST00000538280 KLHL17Q6TDP4 642 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 CCDC81Q6ZN84 652 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 DCDC5Q6ZRR9 648 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 NUDT18Q6ZVK8 323 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 SLCO6A1Q86UG4 719 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 IGFN1Q86VF2 1251 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 YAF2Q8IY57 180 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 AQP11Q8NBQ7 271 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 OR4D11Q8NGI4 311 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 OR52E1Q8NGJ3 308 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 OR6Q1Q8NGQ2 317 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 C9orf43Q8TAL5 461 aaPredicted RBP8.74□□□□□ -1.01
DDB1-211ENST00000538280 MIPOL1Q8TD10 442 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 S100ZQ8WXG8 99 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 EXOSC8Q96B26 276 aaKnown RBP8.74□□□□□ -1.01
DDB1-211ENST00000538280 SLC35G5Q96KT7 338 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 ZNF354BQ96LW1 612 aa8.74□□□□□ -1.01
DDB1-211ENST00000538280 AMDHD1Q96NU7 426 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms