RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 A0A0G2JN53 185 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 PRAMEF27A3QJZ7 478 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 ASNA1O43681 348 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 ADH1CP00326 375 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 DDX5P17844 614 aaKnown RBP13.56□□□□□ -0.24
USP44-203ENST00000537435 TNNI3P19429 210 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 CD72P21854 359 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 RPS19P39019 145 aaKnown RBP13.56□□□□□ -0.24
USP44-203ENST00000537435 REEP5Q00765 189 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 PIN1Q13526 163 aaPredicted RBP13.56□□□□□ -0.24
USP44-203ENST00000537435 ELAVL3Q14576 367 aaKnown RBP13.56□□□□□ -0.24
USP44-203ENST00000537435 TMEM52BQ4KMG9 183 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 MFSD4BQ5TF39 518 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 ERN2Q76MJ5 926 aaKnown RBP13.56□□□□□ -0.24
USP44-203ENST00000537435 COMTD1Q86VU5 262 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 IQCF1Q8N6M8 205 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 AMER3Q8N944 861 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 OR5D16Q8NGK9 328 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 OR8J1Q8NGP2 316 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 POF1BQ8WVV4 589 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 XAGE5Q8WWM1 108 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 RASSF5Q8WWW0 418 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 TREX2Q9BQ50 279 aaPredicted RBP13.56□□□□□ -0.24
USP44-203ENST00000537435 SMURF1Q9HCE7 757 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 P2RX2Q9UBL9 471 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 A4GNTQ9UNA3 340 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 NINQ8N4C6 2090 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 HEPACAM2A8MVW5 462 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 M0R3H8 397 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 NDUFS4O43181 175 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 UGT2B17O75795 530 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 TNFSF8P32971 234 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 HTRA4P83105 476 aaPredicted RBP13.56□□□□□ -0.24
USP44-203ENST00000537435 ARHGAP19Q14CB8 494 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 PAQR6Q6TCH4 344 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 SPATC1Q76KD6 591 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 MMAAQ8IVH4 418 aaKnown RBP13.56□□□□□ -0.24
USP44-203ENST00000537435 SFTPA1Q8IWL2 248 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 ETFBKMTQ8IXQ9 262 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 CELF2-AS1Q8N7Q2 184 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 SCAIQ8N9R8 606 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 RSPRY1Q96DX4 576 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 TRMT61AQ96FX7 289 aaKnown RBP13.56□□□□□ -0.24
USP44-203ENST00000537435 COX14Q96I36 57 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 ZFYVE19Q96K21 471 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 FUZQ9BT04 418 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 MND1Q9BWT6 205 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 BARHL1Q9BZE3 327 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 POLR2J2Q9GZM3 115 aaKnown RBP13.56□□□□□ -0.24
USP44-203ENST00000537435 OR51I1Q9H343 314 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 TVP23BQ9NYZ1 205 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 KIAA1549LQ6ZVL6 1849 aa13.56□□□□□ -0.24
USP44-203ENST00000537435 A8MU76 341 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 WWP2O00308 870 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 OR1F1O43749 312 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 SSX4O60224 188 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 TPST2O60704 377 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 NME6O75414 186 aaPredicted RBP13.55□□□□□ -0.24
USP44-203ENST00000537435 APOA1P02647 267 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 TP53P04637 393 aaPredicted RBP13.55□□□□□ -0.24
USP44-203ENST00000537435 HBQ1P09105 142 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 ENDOUP21128 410 aaKnown RBP13.55□□□□□ -0.24
USP44-203ENST00000537435 PSMA1P25786 263 aaKnown RBP13.55□□□□□ -0.24
USP44-203ENST00000537435 HOXD12P35452 270 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 VIPR2P41587 438 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 CASP3P42574 277 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 CRYBB2P43320 205 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 SMIM11AP58511 58 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 LRIT3Q3SXY7 679 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 OLIG3Q7RTU3 272 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 UBE3DQ7Z6J8 389 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 TRIM69Q86WT6 500 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 KRT73Q86Y46 540 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 RGMAQ96B86 450 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 SLC35G5Q96KT7 338 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 MENTQ9BUN1 341 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 CCDC32Q9BV29 185 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 C3orf14Q9HBI5 128 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 FBXL12Q9NXK8 326 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 TRPC4Q9UBN4 977 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 SEC14L4Q9UDX3 406 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 KLHL3Q9UH77 587 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 ITGB1BP2Q9UKP3 347 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 RBMX2Q9Y388 322 aaKnown RBP13.55□□□□□ -0.24
USP44-203ENST00000537435 MRPS23Q9Y3D9 190 aaKnown RBP13.55□□□□□ -0.24
USP44-203ENST00000537435 MYO7AQ13402 2215 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 A0A1W2PPV9 198 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 PPM1DO15297 605 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 RGS5O15539 181 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 PCCBP05166 539 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 NR2F1P10589 423 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 GPC1P35052 558 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 TIE1P35590 1138 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 LRRC26Q2I0M4 334 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 PODNL1Q6PEZ8 512 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 LRRTM4Q86VH4 590 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 NANOGP1Q8N7R0 232 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 SLC35B4Q969S0 331 aa13.55□□□□□ -0.24
USP44-203ENST00000537435 EFHD2Q96C19 240 aaPredicted RBP13.55□□□□□ -0.24
USP44-203ENST00000537435 OTUB1Q96FW1 271 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms