RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 SLC29A3Q9BZD2 475 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 PLSCR3Q9NRY6 295 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 PLEKHA6Q9Y2H5 1048 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 PCDHB1Q9Y5F3 818 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 ITGB4P16144 1822 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 ANKRD12Q6UB98 2062 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 H3BUI4 141 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 CACNB4O00305 520 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-213ENST00000537002 CSF3P09919 207 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 HOXD8P13378 290 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-213ENST00000537002 PTNP21246 168 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 DRD5P21918 477 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 HTR2AP28223 471 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 SERPINA4P29622 427 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 TGFBR1P36897 503 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 CRISP1P54107 249 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 CDH11P55287 796 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 MLLT11Q13015 90 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-213ENST00000537002 SIRPB2Q5JXA9 342 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 CNIH2Q6PI25 160 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 GALNTL5Q7Z4T8 443 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 CHST4Q8NCG5 386 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 PYCR2Q96C36 320 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 TRIB3Q96RU7 358 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 FAIM2Q9BWQ8 316 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 BTBD2Q9BX70 525 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 SLCO3A1Q9UIG8 710 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 ZFC3H1O60293 1989 aaKnown RBP5.17□□□□□ -1.58
PTPRD-213ENST00000537002 SCN9AQ15858 1988 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 C13orf42A0A1B0GVH6 325 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 MPTX1A8MV57 137 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 C2orf74A8MZ97 194 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 F8W036 122 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 H3BQ06 376 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-213ENST00000537002 TXNL1O43396 289 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 SCGNO76038 276 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 BCHEP06276 602 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 RB1P06400 928 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 SPNP16150 400 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 RAB13P51153 203 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 SH3BP2P78314 561 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 SLC36A4Q6YBV0 504 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 KCTD9Q7L273 389 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 MRPL10Q7Z7H8 261 aaKnown RBP5.17□□□□□ -1.58
PTPRD-213ENST00000537002 CILP2Q8IUL8 1156 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 TRAPPC5Q8IUR0 188 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 TP53INP2Q8IXH6 220 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 PNPLA1Q8N8W4 532 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 ATP6V1C2Q8NEY4 427 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 CLP1Q92989 425 aaKnown RBP5.17□□□□□ -1.58
PTPRD-213ENST00000537002 ISG20Q96AZ6 181 aaKnown RBP5.17□□□□□ -1.58
PTPRD-213ENST00000537002 TCF7L1Q9HCS4 588 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 ASF1BQ9NVP2 202 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 ASB1Q9Y576 335 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 OR6C74A6NCV1 312 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 LOC730098B7Z3J9 87 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 E7EQ34 232 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 GOSR2O14653 212 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 KHNYNO15037 678 aaKnown RBP5.16□□□□□ -1.58
PTPRD-213ENST00000537002 ARPC5O15511 151 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 FFAR2O15552 330 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 SSX5O60225 188 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 SBK3P0C264 359 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 C21orf33P30042 268 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-213ENST00000537002 GPR143P51810 404 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 CDKN2DP55273 166 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 HES5Q5TA89 166 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 C1orf189Q5VU69 101 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 LYPLAL1Q5VWZ2 237 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 PLAG1Q6DJT9 500 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 RPTNQ6XPR3 784 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 HFE2Q6ZVN8 426 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 SSX6Q7RTT6 188 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 LHFPL3Q86UP9 236 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 SLC5A8Q8N695 610 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 ZBTB44Q8NCP5 570 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 OR1M1Q8NGA1 313 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 HMGCLL1Q8TB92 370 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 MAFIPQ8WZ33 124 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 SLC25A46Q96AG3 418 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 RNF32Q9H0A6 362 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 GKN1Q9NS71 199 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 KCTD5Q9NXV2 234 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 CD84Q9UIB8 345 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 LIPT1Q9Y234 373 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 EXOSC1Q9Y3B2 195 aaKnown RBP5.16□□□□□ -1.58
PTPRD-213ENST00000537002 C7orf66A4D0T2 115 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 H1F0P07305 194 aaKnown RBP5.16□□□□□ -1.58
PTPRD-213ENST00000537002 LIPAP38571 399 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 RPL34P49207 117 aaKnown RBP5.16□□□□□ -1.58
PTPRD-213ENST00000537002 KCNQ1P51787 676 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 SPHARQ15513 63 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 VMACQ2NL98 169 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 UGT3A2Q3SY77 523 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 CDNFQ49AH0 187 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 CRTC1Q6UUV9 634 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 TSPAN33Q86UF1 283 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 IQCHQ86VS3 1027 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 EID2Q8N6I1 236 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 ACVR1CQ8NER5 493 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms