RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 IPPKQ9H8X2 491 aa9.3□□□□□ -0.92
CLSTN3-203ENST00000534830 ZBTB26Q9HCK0 441 aa9.3□□□□□ -0.92
CLSTN3-203ENST00000534830 KCNJ16Q9NPI9 418 aa9.3□□□□□ -0.92
CLSTN3-203ENST00000534830 ZNF358Q9NW07 568 aa9.3□□□□□ -0.92
CLSTN3-203ENST00000534830 RNF11Q9Y3C5 154 aa9.3□□□□□ -0.92
CLSTN3-203ENST00000534830 TNPO3Q9Y5L0 923 aaKnown RBP9.3□□□□□ -0.92
CLSTN3-203ENST00000534830 SPACA6W5XKT8 324 aa9.3□□□□□ -0.92
CLSTN3-203ENST00000534830 A0A1B0GVC2 190 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 A0A1W2PR48 441 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 WASHC1A8K0Z3 465 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 HRKO00198 91 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 TMPRSS11DO60235 418 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 EEDO75530 441 aaKnown RBP9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 PRKRAO75569 313 aaKnown RBP9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 IGHG3P01860 377 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 CLPSP04118 112 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 RBP1P09455 135 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 GFAPP14136 432 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 TNNI3P19429 210 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 MSX1P28360 303 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 GALNSP34059 522 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 PHBP35232 272 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 CPSF6Q16630 551 aaKnown RBP eCLIP9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 SPRED3Q2MJR0 410 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 ZNF791Q3KP31 576 aaPredicted RBP9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 EMC4Q5J8M3 183 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 ARHGAP11AQ6P4F7 1023 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 KLC3Q6P597 504 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 RTL4Q6ZR62 310 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 RGS9BPQ6ZS82 235 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 CD163Q86VB7 1156 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 ST13P4Q8IZP2 240 aaPredicted RBP9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 SLC15A4Q8N697 577 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 LILRB4Q8NHJ6 448 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 ASB5Q8WWX0 329 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 PPWD1Q96BP3 646 aaKnown RBP9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 REPS1Q96D71 796 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 MRRFQ96E11 262 aaKnown RBP9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 RBM18Q96H35 190 aaKnown RBP9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 C18orf12Q96KH6 178 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 DGAT2Q96PD7 388 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 ALPK1Q96QP1 1244 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 TTTY12Q9BZ98 90 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 PROK2Q9HC23 129 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 RYDENQ9NUL5 291 aaKnown RBP9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 PHF11Q9UIL8 331 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 EDARQ9UNE0 448 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 ERVK-11Q9UQG0 969 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 ANGPTL3Q9Y5C1 460 aa9.29□□□□□ -0.92
CLSTN3-203ENST00000534830 COL6A5A8TX70 2615 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 STX16-NPEPL1H3BU86 382 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 STX16O14662 325 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 PDE9AO76083 593 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 URI1O94763 535 aaPredicted RBP9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 TOXO94900 526 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 SEMA3DO95025 777 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 CLDN9O95484 217 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 GPR75O95800 540 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 C8BP07358 591 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 HOXD4P09016 255 aaPredicted RBP9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 INHBBP09529 407 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 SBK3P0C264 359 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 FAM58BPP0C7Q3 252 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 CCL3P10147 92 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 COL6A2P12110 1019 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 ALOX15P16050 662 aaPredicted RBP9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 CHRNB4P30926 498 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 TLX1P31314 330 aaPredicted RBP9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 BUD31P41223 144 aaPredicted RBP9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 PIK3CGP48736 1102 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 NEK2P51955 445 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 RAP1GDS1P52306 607 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 SLC37A1P57057 533 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 PPIAP62937 165 aaKnown RBP9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 TFF3Q07654 80 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 ASPHQ12797 758 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 TRAF3Q13114 568 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 DDX39BQ13838 428 aaKnown RBP9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 UAP1Q16222 522 aaPredicted RBP9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 GLE1Q53GS7 698 aaKnown RBP9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 NDUFAF5Q5TEU4 345 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 OPN5Q6U736 354 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 PTGR2Q8N8N7 351 aaPredicted RBP9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 ZNF441Q8N8Z8 693 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 NOA1Q8NC60 698 aaKnown RBP9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 OR52B6Q8NGF0 335 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 PAQR8Q8TEZ7 354 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 DCAKDQ8WVC6 231 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 UCN3Q969E3 161 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 ARSGQ96EG1 525 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 PHF21BQ96EK2 531 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 RMND5BQ96G75 393 aaPredicted RBP9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 FBXL20Q96IG2 436 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 C16orf45Q96MC5 204 aaPredicted RBP9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 NSUN5Q96P11 429 aaKnown RBP9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 CDK15Q96Q40 435 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 PAFAH2Q99487 392 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 FAM173AQ9BQD7 235 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 CENPKQ9BS16 269 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 TSPYL1Q9H0U9 437 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms