RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 EXT2Q93063 718 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 MBD6Q96DN6 1003 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 GAL3ST4Q96RP7 486 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 RBBP8Q99708 897 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 TIMP4Q99727 224 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 CPNE1Q99829 537 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 PELOQ9BRX2 385 aaKnown RBP12.75□□□□□ -0.37
CCDC84-208ENST00000534656 DOHHQ9BU89 302 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 ERVK-6Q9BXR3 956 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 WWTR1Q9GZV5 400 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 GSX1Q9H4S2 264 aaPredicted RBP12.75□□□□□ -0.37
CCDC84-208ENST00000534656 TXNDC16Q9P2K2 825 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 MTRF1LQ9UGC7 380 aaKnown RBP12.75□□□□□ -0.37
CCDC84-208ENST00000534656 ADGRE2Q9UHX3 823 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 PHF11Q9UIL8 331 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 FOXD3Q9UJU5 478 aaPredicted RBP12.75□□□□□ -0.37
CCDC84-208ENST00000534656 CBLCQ9ULV8 474 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 ERVK-19Q9WJR5 959 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 C15orf38-AP3S2A0A0A6YYH1 394 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 OR6C76A6NM76 312 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 EFCAB8A8MWE9 144 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 KDM4EB2RXH2 506 aaPredicted RBP12.74□□□□□ -0.37
CCDC84-208ENST00000534656 K7EPI3 171 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 PLPP1O14494 284 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 ZSCAN12O43309 604 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 PRKRAO75569 313 aaKnown RBP12.74□□□□□ -0.37
CCDC84-208ENST00000534656 LRATO95237 230 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 GPR75O95800 540 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 IL2RAP01589 272 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 SSTR1P30872 391 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 BUD31P41223 144 aaPredicted RBP12.74□□□□□ -0.37
CCDC84-208ENST00000534656 RAP1GDS1P52306 607 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 HNRNPH2P55795 449 aaKnown RBP12.74□□□□□ -0.37
CCDC84-208ENST00000534656 WNT3P56703 355 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 RAB10P61026 200 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 ADAM8P78325 824 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 CRYZQ08257 329 aaKnown RBP12.74□□□□□ -0.37
CCDC84-208ENST00000534656 ZNF267Q14586 743 aaPredicted RBP12.74□□□□□ -0.37
CCDC84-208ENST00000534656 EBPQ15125 230 aaKnown RBP12.74□□□□□ -0.37
CCDC84-208ENST00000534656 ZKSCAN8Q15776 578 aaPredicted RBP12.74□□□□□ -0.37
CCDC84-208ENST00000534656 TBCELQ5QJ74 424 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 GRHL2Q6ISB3 625 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 CREG2Q8IUH2 290 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 LACC1Q8IV20 430 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 MMP21Q8N119 569 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 ZCCHC7Q8N3Z6 543 aaKnown RBP12.74□□□□□ -0.37
CCDC84-208ENST00000534656 RNF175Q8N4F7 328 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 STAG3L4Q8TBR4 150 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 PYROXD1Q8WU10 500 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 CDKL2Q92772 493 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 ZNF597Q96LX8 424 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 CENPKQ9BS16 269 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 ALG9Q9H6U8 611 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 NUDT4Q9NZJ9 180 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 OPTCQ9UBM4 332 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 RPH3AQ9Y2J0 694 aaPredicted RBP12.74□□□□□ -0.37
CCDC84-208ENST00000534656 NCKAP5O14513 1909 aa12.74□□□□□ -0.37
CCDC84-208ENST00000534656 NIPBLQ6KC79 2804 aaeCLIP12.74□□□□□ -0.37
CCDC84-208ENST00000534656 ARHGAP21Q5T5U3 1957 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 WASHC1A8K0Z3 465 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 TP53I11O14683 189 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 OR10H2O60403 315 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 CLPSP04118 112 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 TACR1P25103 407 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 GALNSP34059 522 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 GP5P40197 560 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 PIK3CBP42338 1070 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 RPL21P46778 160 aaKnown RBP12.73□□□□□ -0.37
CCDC84-208ENST00000534656 ZNF136P52737 540 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 ARFIP1P53367 373 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 DDX39BQ13838 428 aaKnown RBP12.73□□□□□ -0.37
CCDC84-208ENST00000534656 SF3B4Q15427 424 aaKnown RBP eCLIP12.73□□□□□ -0.37
CCDC84-208ENST00000534656 MRM1Q6IN84 353 aaKnown RBP12.73□□□□□ -0.37
CCDC84-208ENST00000534656 PAMR1Q6UXH9 720 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 CYS1Q717R9 158 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 ISCA2Q86U28 154 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 PM20D2Q8IYS1 436 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 TAGAPQ8N103 731 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 ZNF441Q8N8Z8 693 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 HUS1BQ8NHY5 278 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 UBTD2Q8WUN7 234 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 DIO2Q92813 273 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 RIT1Q92963 219 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 ATOH8Q96SQ7 321 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 PRDM14Q9GZV8 571 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 SNX24Q9Y343 169 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 TSC22D4Q9Y3Q8 395 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 ASB4Q9Y574 426 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 IKBKGQ9Y6K9 419 aa12.73□□□□□ -0.37
CCDC84-208ENST00000534656 C2orf92A0A1B0GVN3 265 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 FAM159BA6NKW6 160 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 CAPN14A8MX76 684 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 SUPT3HB4E1H0 165 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 CCDC188H7C350 402 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 SUPT3HO75486 399 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 TRAPPC6AO75865 159 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 ACSL3O95573 720 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 RAF1P04049 648 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 HPNP05981 417 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 EPXP11678 715 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms