RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 MMP25Q9NPA2 562 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 MKKSQ9NPJ1 570 aaPredicted RBP2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 PARVAQ9NVD7 372 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 IL1RAPL1Q9NZN1 696 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 OR6C2Q9NZP2 312 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 CRLS1Q9UJA2 301 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 RUVBL2Q9Y230 463 aaKnown RBP2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 DRG1Q9Y295 367 aaKnown RBP2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 R3HDM2Q9Y2K5 976 aaKnown RBP2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 HEY1Q9Y5J3 304 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 DNAJC13O75165 2243 aa2.73□□□□□ -1.97
CHMP4A-208ENST00000534106 IGKV1-8A0A0C4DH67 115 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 A0A1B0GVC2 190 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 A0A1W2PPV9 198 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 SLC5A10A0PJK1 596 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 OR51F1A6NGY5 319 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 ZNF860A6NHJ4 632 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 IQCF5A8MTL0 148 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 A8MV72 311 aaPredicted RBP2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 DEFB108AA8MXU0 73 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 EEF1E1-BLOC1S5C9J1V9 151 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 KLRC4-KLRK1H3BQV0 150 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 EEF1E1O43324 174 aaKnown RBP2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 CD5LO43866 347 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 OR1I1O60431 355 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 SRPX2O60687 465 aaPredicted RBP2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 ZNF354AO60765 605 aaPredicted RBP2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 NDUFS7O75251 213 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 GLSO94925 669 aaPredicted RBP2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 SOX30O94993 753 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 OR6B1O95007 311 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 PRSS23O95084 383 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 AP2A1O95782 977 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 PLAUP00749 431 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 ANXA5P08758 320 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 FAM157CP0CG43 387 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 SKILP12757 684 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 ATP1A3P13637 1013 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 OSMP13725 252 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 ALOX15P16050 662 aaPredicted RBP2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 TPH1P17752 444 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 SLC6A2P23975 617 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 PTPN3P26045 913 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 CCR7P32248 378 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 SERPINB6P35237 376 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 RBMXP38159 391 aaKnown RBP2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 ARHGAP25P42331 645 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 XCR1P46094 333 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 TRPC1P48995 793 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 DNASE1L1P49184 302 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 ASCL1P50553 236 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 ATP5J2P56134 94 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 OR4D2P58180 307 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 SLC26A5P58743 744 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 OLR1P78380 273 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 BTG2P78543 158 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 IFI35P80217 286 aaPredicted RBP2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 CBX1P83916 185 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 RHAGQ02094 409 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 SLC25A11Q02978 314 aaKnown RBP2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 PPIDQ08752 370 aaKnown RBP2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 FAM27E3Q08E93 113 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 MALLQ13021 153 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 MSLNQ13421 630 aaPredicted RBP2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 ITGA9Q13797 1035 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 SPARCL1Q14515 664 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 NSDHLQ15738 373 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 SLC1A5Q15758 541 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 TPD52L1Q16890 204 aaPredicted RBP2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 CLEC12BQ2HXU8 276 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 MST1LQ2TV78 715 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 FAM174BQ3ZCQ3 159 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 UBAP2Q5T6F2 1119 aaKnown RBP2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 RIPPLY2Q5TAB7 128 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 KIAA0930Q6ICG6 404 aaPredicted RBP2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 CCDC70Q6NSX1 233 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 PPP4R4Q6NUP7 873 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 PRMT9Q6P2P2 845 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 IL20RBQ6UXL0 311 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 ZNF571Q7Z3V5 609 aaPredicted RBP2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 GLT6D1Q7Z4J2 308 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 C1QL2Q7Z5L3 287 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 IRF2BP2Q7Z5L9 587 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 AMIGO2Q86SJ2 522 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 LUZP2Q86TE4 346 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 PEG10Q86TG7 708 aaKnown RBP2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 PDSS2Q86YH6 399 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 LRRC49Q8IUZ0 686 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 LNX2Q8N448 690 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 SLC5A8Q8N695 610 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 TMEM251Q8N6I4 163 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 FITM2Q8N6M3 262 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 CSNK1A1LQ8N752 337 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 HORMAD2Q8N7B1 307 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 Q8N9P0 234 aaPredicted RBP2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 NFAM1Q8NET5 270 aaPredicted RBP2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 TOR1AIP2Q8NFQ8 470 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 IPMKQ8NFU5 416 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 OR2L3Q8NG85 312 aa2.72□□□□□ -1.97
CHMP4A-208ENST00000534106 OR5T3Q8NGG3 340 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms