RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 TIMM50Q3ZCQ8 353 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 TMPRSS11AQ6ZMR5 421 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 TRAM1L1Q8N609 369 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 UCN3Q969E3 161 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 EXOSC8Q96B26 276 aaKnown RBP18.37■□□□□ 0.53
CAPN1-226ENST00000533820 TMEM19Q96HH6 336 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 OR2A14Q96R47 310 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 A3GALT2U3KPV4 340 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 DNAH14Q0VDD8 3507 aa18.37■□□□□ 0.53
CAPN1-226ENST00000533820 PLD2O14939 933 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 CPNE3O75131 537 aaKnown RBP18.36■□□□□ 0.53
CAPN1-226ENST00000533820 MANFP55145 182 aaKnown RBP18.36■□□□□ 0.53
CAPN1-226ENST00000533820 HIST2H2AA3Q6FI13 130 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 FAM71E1Q6IPT2 247 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 BRAT1Q6PJG6 821 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 CASP12Q6UXS9 341 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 ADIPOR2Q86V24 386 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 UCK2Q9BZX2 261 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 DYRK4Q9NR20 520 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 DNMT3AQ9Y6K1 912 aaPredicted RBP18.36■□□□□ 0.53
CAPN1-226ENST00000533820 A0A0C4DFX4 3053 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 TLX2O43763 284 aaPredicted RBP18.36■□□□□ 0.53
CAPN1-226ENST00000533820 SLITRK5O94991 958 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 SNX4O95219 450 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 CYP17A1P05093 508 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 C8AP07357 584 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 PXNP49023 591 aaPredicted RBP18.36■□□□□ 0.53
CAPN1-226ENST00000533820 TAP2Q03519 686 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 RBBP4Q09028 425 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 CRB2Q5IJ48 1285 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 REEP3Q6NUK4 255 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 ZNF438Q7Z4V0 828 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 GPR32P1Q8NGA4 272 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 HERVK_113Q902F9 699 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 SNAPC3Q92966 411 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 POLR2J3Q9H1A7 115 aaKnown RBP18.36■□□□□ 0.53
CAPN1-226ENST00000533820 TMEM38AQ9H6F2 299 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 HCFC2Q9Y5Z7 792 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 WNT6Q9Y6F9 365 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 USP34Q70CQ2 3546 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 AP2A2O94973 939 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 CDRT1O95170 752 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 HBQ1P09105 142 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 ZNF30P17039 623 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 LIMK1P53667 647 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 SLC7A9P82251 487 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 NFE2L1Q14494 772 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 DDX53Q86TM3 631 aaKnown RBP18.36■□□□□ 0.53
CAPN1-226ENST00000533820 OR4D11Q8NGI4 311 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 REPS1Q96D71 796 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 F2RL3Q96RI0 385 aa18.36■□□□□ 0.53
CAPN1-226ENST00000533820 SERPIND1P05546 499 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 PSMA1P25786 263 aaKnown RBP18.35■□□□□ 0.53
CAPN1-226ENST00000533820 LIMS1P48059 325 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 PRLHRP49683 370 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 XKP51811 444 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 DEFB103AP81534 67 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 CAMKK1Q8N5S9 505 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 SIMC1Q8NDZ2 872 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 C9orf43Q8TAL5 461 aaPredicted RBP18.35■□□□□ 0.53
CAPN1-226ENST00000533820 ASB15Q8WXK1 588 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 SEMA3GQ9NS98 782 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 ARPC4-TTLL3A0A0A6YYG9 625 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 A0A1W2PQ09 198 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 M0R3H8 397 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 ALPPL2P10696 532 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 PTX3P26022 381 aaPredicted RBP18.35■□□□□ 0.53
CAPN1-226ENST00000533820 HTR3AP46098 478 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 CAV3P56539 151 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 PCBP3P57721 371 aaKnown RBP18.35■□□□□ 0.53
CAPN1-226ENST00000533820 ZNF91Q05481 1191 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 GNA13Q14344 377 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 DCST1Q5T197 706 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 SHFQ7M4L6 423 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 NLRP8Q86W28 1048 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 TMC8Q8IU68 726 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 GOT1L1Q8NHS2 421 aaPredicted RBP18.35■□□□□ 0.53
CAPN1-226ENST00000533820 SLC5A11Q8WWX8 675 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 KLHL6Q8WZ60 621 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 YIPF4Q9BSR8 244 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 TSSK6Q9BXA6 273 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 MVB12BQ9H7P6 319 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 ABCB9Q9NP78 766 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 MYO10Q9HD67 2058 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 NUMA1Q14980 2115 aa18.35■□□□□ 0.53
CAPN1-226ENST00000533820 CHD7Q9P2D1 2997 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 FEZF1A0PJY2 475 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 RUNX1T1Q06455 604 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 ZNF33BQ06732 778 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 C22orf42Q6IC83 251 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 TCTN3Q6NUS6 607 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 LIPIQ6XZB0 460 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 ZNF517Q6ZMY9 492 aaPredicted RBP18.34■□□□□ 0.53
CAPN1-226ENST00000533820 RASGRP3Q8IV61 690 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 ZFP41Q8N8Y5 198 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 OR5D16Q8NGK9 328 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 PRR14Q9BWN1 585 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 KCNK12Q9HB15 430 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 MALT1Q9UDY8 824 aa18.34■□□□□ 0.53
CAPN1-226ENST00000533820 TEKT2Q9UIF3 430 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms