RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 ZNF717Q9BY31 904 aaPredicted RBP10.48□□□□□ -0.73
CLCF1-202ENST00000533438 OR8D2Q9GZM6 311 aa10.48□□□□□ -0.73
CLCF1-202ENST00000533438 MRPL46Q9H2W6 279 aaKnown RBP10.48□□□□□ -0.73
CLCF1-202ENST00000533438 MS4A12Q9NXJ0 267 aa10.48□□□□□ -0.73
CLCF1-202ENST00000533438 NKIRAS1Q9NYS0 192 aa10.48□□□□□ -0.73
CLCF1-202ENST00000533438 SLC17A7Q9P2U7 560 aa10.48□□□□□ -0.73
CLCF1-202ENST00000533438 XPR1Q9UBH6 696 aa10.48□□□□□ -0.73
CLCF1-202ENST00000533438 ERVK-11Q9UQG0 969 aa10.48□□□□□ -0.73
CLCF1-202ENST00000533438 PCDHGA11Q9Y5H2 935 aa10.48□□□□□ -0.73
CLCF1-202ENST00000533438 SPACA6W5XKT8 324 aa10.48□□□□□ -0.73
CLCF1-202ENST00000533438 HCFC1P51610 2035 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 C19orf84I3L1E1 186 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 IGKV3-11P04433 115 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 SBK3P0C264 359 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 GFAPP14136 432 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 PTGS2P35354 604 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 STT3AP46977 705 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 NR0B1P51843 470 aaKnown RBP10.47□□□□□ -0.73
CLCF1-202ENST00000533438 HNRNPH2P55795 449 aaKnown RBP10.47□□□□□ -0.73
CLCF1-202ENST00000533438 RPS13P62277 151 aaKnown RBP10.47□□□□□ -0.73
CLCF1-202ENST00000533438 TNFRSF17Q02223 184 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 SLAMF1Q13291 335 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 BIKQ13323 160 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 DDX39BQ13838 428 aaKnown RBP10.47□□□□□ -0.73
CLCF1-202ENST00000533438 TESK1Q15569 626 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 C18orf63Q68DL7 685 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 MRM1Q6IN84 353 aaKnown RBP10.47□□□□□ -0.73
CLCF1-202ENST00000533438 METTL2BQ6P1Q9 378 aaKnown RBP10.47□□□□□ -0.73
CLCF1-202ENST00000533438 C3P1Q6ZMU1 363 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 DGAT2L6Q6ZPD8 337 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 GOLGA7Q7Z5G4 137 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 CD163Q86VB7 1156 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 OR4N5Q8IXE1 308 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 EID3Q8N140 333 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 L3MBTL4Q8NA19 623 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 GOLM1Q8NBJ4 401 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 OR2M7Q8NG81 312 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 WDR20Q8TBZ3 569 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 RDH11Q8TC12 318 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 TANKQ92844 425 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 RGMAQ96B86 450 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 MTFMTQ96DP5 389 aaKnown RBP10.47□□□□□ -0.73
CLCF1-202ENST00000533438 SCYL1Q96KG9 808 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 FAM111AQ96PZ2 611 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 MTERF1Q99551 399 aaKnown RBP10.47□□□□□ -0.73
CLCF1-202ENST00000533438 C12orf65Q9H3J6 166 aaKnown RBP10.47□□□□□ -0.73
CLCF1-202ENST00000533438 RPF2Q9H7B2 306 aaKnown RBP10.47□□□□□ -0.73
CLCF1-202ENST00000533438 ZDHHC11Q9H8X9 412 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 PSD3Q9NYI0 1048 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 MID2Q9UJV3 735 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 ANGPTL3Q9Y5C1 460 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 HRH3Q9Y5N1 445 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 DNAJC13O75165 2243 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 PKDREJQ9NTG1 2253 aa10.47□□□□□ -0.73
CLCF1-202ENST00000533438 NCKAP5O14513 1909 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 A0A0A6YYD5 115 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 A0A0G2JMM0 328 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 A0A1W2PPB8 328 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 A0A1W2PRS3 328 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 KIR3DP1A8MWS1 328 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 PROM1O43490 865 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 CDC40O60508 579 aaKnown RBP eCLIP10.46□□□□□ -0.73
CLCF1-202ENST00000533438 PRKRAO75569 313 aaKnown RBP10.46□□□□□ -0.73
CLCF1-202ENST00000533438 GLSO94925 669 aaPredicted RBP10.46□□□□□ -0.73
CLCF1-202ENST00000533438 SIX3O95343 332 aaPredicted RBP10.46□□□□□ -0.73
CLCF1-202ENST00000533438 TPOP07202 933 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 COX7A2P14406 83 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 COX6B1P14854 86 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 CHN1P15882 459 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 TNNI3P19429 210 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 CNR1P21554 472 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 BSGP35613 385 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 RAP1GDS1P52306 607 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 WDR4P57081 412 aaKnown RBP10.46□□□□□ -0.73
CLCF1-202ENST00000533438 FOLH1Q04609 750 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 CUL3Q13618 768 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 GTF2H2Q13888 395 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 MPEG1Q2M385 716 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 ZNF750Q32MQ0 723 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 PIGGQ5H8A4 983 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 GTF2H2CQ6P1K8 395 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 ARHGAP11AQ6P4F7 1023 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 RTL4Q6ZR62 310 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 GDF7Q7Z4P5 450 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 GPR180Q86V85 440 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 MYLK4Q86YV6 388 aaPredicted RBP10.46□□□□□ -0.73
CLCF1-202ENST00000533438 C9orf40Q8IXQ3 194 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 MARVELD2Q8N4S9 558 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 ANKRD42Q8N9B4 389 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 ACBD4Q8NC06 268 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 OR5L2Q8NGL0 311 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 NUBPLQ8TB37 319 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 SREK1Q8WXA9 508 aaKnown RBP10.46□□□□□ -0.73
CLCF1-202ENST00000533438 REPS1Q96D71 796 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 SENP5Q96HI0 755 aaPredicted RBP10.46□□□□□ -0.73
CLCF1-202ENST00000533438 DGAT2Q96PD7 388 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 CENPKQ9BS16 269 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 TTTY12Q9BZ98 90 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 TRIM8Q9BZR9 551 aa10.46□□□□□ -0.73
CLCF1-202ENST00000533438 DDX31Q9H8H2 851 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms