RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 FEN1P39748 380 aaKnown RBP11.16□□□□□ -0.62
SSBP3-214ENST00000533209 CLCN2P51788 898 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 ZNF267Q14586 743 aaPredicted RBP11.16□□□□□ -0.62
SSBP3-214ENST00000533209 SPRED3Q2MJR0 410 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 ACER2Q5QJU3 275 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 FAM180BQ6P0A1 224 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 IKBIPQ70UQ0 350 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 CRLF3Q8IUI8 442 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 ARMC10Q8N2F6 343 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 ZNF843Q8N446 348 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 RBMXL3Q8N7X1 1067 aaKnown RBP11.16□□□□□ -0.62
SSBP3-214ENST00000533209 OR1N1Q8NGS0 311 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 RIT1Q92963 219 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 FBXL20Q96IG2 436 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 PPP1R36Q96LQ0 422 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 ZNF354BQ96LW1 612 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 NUF2Q9BZD4 464 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 AKTIPQ9H8T0 292 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 MEAF6Q9HAF1 191 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 CXorf21Q9HAI6 301 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 INTS9Q9NV88 658 aaKnown RBP11.16□□□□□ -0.62
SSBP3-214ENST00000533209 TAS2R7Q9NYW3 318 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 STMN3Q9NZ72 180 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 BAIAP2L1Q9UHR4 511 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 UTS2RQ9UKP6 389 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 CSAG2Q9Y5P2 127 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 COL6A6A6NMZ7 2263 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 TMEM200CA6NKL6 621 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 EIF4E1BA6NMX2 242 aaKnown RBP11.15□□□□□ -0.62
SSBP3-214ENST00000533209 SDHDO14521 159 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 HDAC3O15379 428 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 ATP8B1O43520 1251 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 CLPSP04118 112 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 ATP1B1P05026 303 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 CT62P0C5K7 136 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 KITP10721 976 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 CSNK2A2P19784 350 aaPredicted RBP11.15□□□□□ -0.62
SSBP3-214ENST00000533209 MAPK1P28482 360 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 SOX18P35713 384 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 ERVK-8P63133 956 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 MGAT2Q10469 447 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 KLRB1Q12918 225 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 CEBPEQ15744 281 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 SMU1Q2TAY7 513 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 NADK2Q4G0N4 442 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 COLEC12Q5KU26 742 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 ABHD17BQ5VST6 288 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 IL23RQ5VWK5 629 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 RPS19BP1Q86WX3 136 aaKnown RBP11.15□□□□□ -0.62
SSBP3-214ENST00000533209 TICAM1Q8IUC6 712 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 WDR75Q8IWA0 830 aaKnown RBP11.15□□□□□ -0.62
SSBP3-214ENST00000533209 GALNT12Q8IXK2 581 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 LGI4Q8N135 537 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 LRRC25Q8N386 305 aaPredicted RBP11.15□□□□□ -0.62
SSBP3-214ENST00000533209 LIX1Q8N485 282 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 ZADH2Q8N4Q0 377 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 SLC5A8Q8N695 610 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 FNDC5Q8NAU1 212 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 CLHC1Q8NHS4 586 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 LRRC8CQ8TDW0 803 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 CKAP2Q8WWK9 683 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 TM9SF4Q92544 642 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 GFM2Q969S9 779 aaKnown RBP11.15□□□□□ -0.62
SSBP3-214ENST00000533209 EXOSC8Q96B26 276 aaKnown RBP11.15□□□□□ -0.62
SSBP3-214ENST00000533209 C7orf26Q96N11 449 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 TSSK3Q96PN8 268 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 C1orf50Q9BV19 199 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 CNPPD1Q9BV87 410 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 MFRPQ9BY79 579 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 DEFB126Q9BYW3 111 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 RNF32Q9H0A6 362 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 CDCP1Q9H5V8 836 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 EPS8L2Q9H6S3 715 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 SLC35C2Q9NQQ7 365 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 PLA2G3Q9NZ20 509 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 MARCOQ9UEW3 520 aaPredicted RBP11.15□□□□□ -0.62
SSBP3-214ENST00000533209 TEKT2Q9UIF3 430 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 ERVK-19Q9WJR5 959 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 ZNF780BQ9Y6R6 833 aa11.15□□□□□ -0.62
SSBP3-214ENST00000533209 TNRC6AQ8NDV7 1962 aaKnown RBP11.15□□□□□ -0.62
SSBP3-214ENST00000533209 MYO1GB0I1T2 1018 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 SLCO1B7G3V0H7 640 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 AKAP10O43572 662 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 DYRK3O43781 588 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 TBX19O60806 448 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 ZFAND5O76080 213 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 LRATO95237 230 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 WDPCPO95876 746 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 S1PR1P21453 382 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 NT5EP21589 574 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 PTGER1P34995 402 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 ASMTP46597 345 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 SLC37A1P57057 533 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 MLF1P58340 268 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 EMX2Q04743 252 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 FUT7Q11130 342 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 LTB4RQ15722 352 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 MEP1AQ16819 746 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 PRICKLE4Q2TBC4 344 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 ZNF385BQ569K4 471 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms