RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 DCTN3O75935 186 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 KRT6AP02538 564 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 KRT6BP04259 564 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 TPOP07202 933 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 PEBP1P30086 187 aaKnown RBP10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 CD96P40200 585 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 KRT6CP48668 564 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 NEK2P51955 445 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 VSX2P58304 361 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 PRDX1Q06830 199 aaKnown RBP10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 GTF3C1Q12789 2109 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 IFT88Q13099 833 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 E2F2Q14209 437 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 SF1Q15637 639 aaKnown RBP10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 HIST2H2ACQ16777 129 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 MEP1AQ16819 746 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 MUM1Q2TAK8 710 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 DEFB113Q30KQ7 82 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 METTL21CQ5VZV1 264 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 ICE2Q659A1 982 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 HIST2H2AA3Q6FI13 130 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 SPINK14Q6IE38 97 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 FIGLAQ6QHK4 219 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 C6orf89Q6UWU4 347 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 Q6ZSR9 355 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 LARP4Q71RC2 724 aaKnown RBP eCLIP10.57□□□□□ -0.724e-8■■□□□ 13.7
TRAPPC4-213ENST00000533149 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 TMPRSS11BQ86T26 416 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 CD163Q86VB7 1156 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 DTWD1Q8N5C7 304 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 CEP70Q8NHQ1 597 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 ZUFSPQ96AP4 578 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 MAELQ96JY0 434 aaKnown RBP10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 PRAP1Q96NZ9 151 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 CCT7Q99832 543 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 EFCAB11Q9BUY7 163 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 YIPF2Q9BWQ6 316 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 HES7Q9BYE0 225 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 TP63Q9H3D4 680 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 EHD1Q9H4M9 534 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 AKTIPQ9H8T0 292 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 PELI2Q9HAT8 420 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 RASSF1Q9NS23 344 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 LRFN1Q9P244 771 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 TRPC4Q9UBN4 977 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 ZNF490Q9ULM2 529 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 INTS1Q8N201 2190 aaKnown RBP10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 RTTNQ86VV8 2226 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 E9PBE3 544 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 H0YIV9 168 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 SLC28A1O00337 649 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 FCHO1O14526 889 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 CCDC22O60826 627 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 FKBP9O95302 570 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 PDYNP01213 254 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 RAF1P04049 648 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 SP1P08047 785 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 NCF2P19878 526 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 CMPK1P30085 196 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 HOXC12P31275 282 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 CCR8P51685 355 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 ABATP80404 500 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 MEF2AQ02078 507 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 LAPTM5Q13571 262 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 SLBPQ14493 270 aaKnown RBP eCLIP10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 XKR7Q5GH72 579 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 PAGE2BQ5JRK9 111 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 SPDYAQ5MJ70 313 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 FRG2Q64ET8 278 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 SLC25A25Q6KCM7 469 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 H3F3CQ6NXT2 135 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 MED27Q6P2C8 311 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 TMEM205Q6UW68 189 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 TRPM8Q7Z2W7 1104 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 TRIM46Q7Z4K8 759 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 GALNTL5Q7Z4T8 443 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 FGD2Q7Z6J4 655 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 ZZZ3Q8IYH5 903 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 KRT78Q8N1N4 520 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 CPSF7Q8N684 471 aaKnown RBP10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 FITM2Q8N6M3 262 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 ABHD11Q8NFV4 315 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 OR7G3Q8NG95 312 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 OR4K1Q8NGD4 311 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 SELENOMQ8WWX9 145 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 TUBGCP3Q96CW5 907 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 LRRC37BQ96QE4 947 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 FRG2BQ96QU4 278 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 HBEGFQ99075 208 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 GPATCH1Q9BRR8 931 aaKnown RBP10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 TGIF2Q9GZN2 237 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 SPNS1Q9H2V7 528 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 ELOVL6Q9H5J4 265 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 MRPS30Q9NP92 439 aaKnown RBP10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 MKKSQ9NPJ1 570 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 ANKRD10Q9NXR5 420 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 L3MBTL1Q9Y468 752 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 PCDHGA11Q9Y5H2 935 aa10.56□□□□□ -0.72
TRAPPC4-213ENST00000533149 FLNAP21333 2647 aaKnown RBP10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 SERTM1A2A2V5 107 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms